Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0491 ATGGCGTCGTTCCGACGGACTTTGTCGCCGGCGCACCCCGATCGGCAGTACCAAAACGGTGTTGGCTCGTTTTCAGTTTCTTCTCCTCATCACAAGTTTGCTTCTAGTGCTAAGTATGCTTCGCCATTACCAGTGTTGTTTGCGTACGTAGCCAGTTTGCGGAGGTTTCTTGCTGGGTTTGTTGTGCGGCGGCATGCTCGGAAAGGGCAATGGAGAAGAGCATTGTTTAGCTGTTTGATATTTTTCTTCTTAGGTTTCTTGTGGGGTATGTTTCCTATTGGTCACGTTGTCGATGACATTCGCCGTCAGGATGTCTCATTTGAGATCAAGCCGCCTCGCGCAAATGCAGAATTGGTCCCTGAGGATCGTCCTTTGAAGAATGACGAGGCTTTTGTGATTAATCCAGTGCGTTTGAGTTTCGAAAAGCATAGTGATACCGACGATACGCTCGATTTTGTGCCGAGGAAGCAATTGATTGTGGTGACTCCCACATATAATCGGGCGTTTCAAGCCTATTTTTTAAACAGGTTGGGTCACTTGCTCAGGCTCGTACCTCCGCCAGTTCTGTGGATTGTAGTGGAAATGAATTCAGCTTCTATGGAAACTGCTGAAATACTGAGGAAAACTGGGGTCATGTATAGGCATTTGGTCTGCACTAAGAACTCCACAAATGTGAAGGACAGGGGAGTTCATCAAAGGAATACGGCGTTGGAGCACATTGAGCGCCATAGGCTAGATGGGATTGTCTACTTCGCAGATGACGATAATATATATTCTCTCGAGTTATTTGAGACCTTGAGAGACATGAGACGCTTCCGCACTTGGCCTGTTGCCATGCTTGCACAAAGCAAAAATAAGGCCATCTTGGAGGGTCCAGTATGCAATGCAAGTCAAGTGATCGGGTGGCATACAAATGAGAGAAGTAAAAGAGTTCGTAGATTTCATGTTGATATGTCAGGATTTGCTTTTAACAGCACAATCTTGTGGGATTTTAAAAGATGGAAGCGCCCTACATCAAATCCTATTCGCCAATTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATCGAACAACTGGTGGAAGACGAGAGTCAAATGGAAGGTTCACCTACTGGTTGCTCCAAAATAATGAATTGGCATCTCCATTTGGATGCTCATAATACAGATTATCCCAAGAGTTGGCTCCTACATAAAAACCTAGATGCTGTCATCCCTGTCAATTTACCTGTAATCCATGTCGATGCATCTCTGGATAGGTACTACTTCAATTTTAGGCCAGTGGCGCTGCCGCGTTTTGTTCCCTGGGGGGAAAAAGGTTCCCTGGAGCAAGGAAGGGGGAATATTGATCAAGTTGCATCTGGGTCCATTGTGTCGGATGGAGCTACTGGTGGCAAATTCGATGTTTTGACAAAACTGTTTCTAACATACGGCTTGTATCAAAATTAG 1452 0.4545 MASFRRTLSPAHPDRQYQNGVGSFSVSSPHHKFASSAKYASPLPVLFAYVASLRRFLAGFVVRRHARKGQWRRALFSCLIFFFLGFLWGMFPIGHVVDDIRRQDVSFEIKPPRANAELVPEDRPLKNDEAFVINPVRLSFEKHSDTDDTLDFVPRKQLIVVTPTYNRAFQAYFLNRLGHLLRLVPPPVLWIVVEMNSASMETAEILRKTGVMYRHLVCTKNSTNVKDRGVHQRNTALEHIERHRLDGIVYFADDDNIYSLELFETLRDMRRFRTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNERSKRVRRFHVDMSGFAFNSTILWDFKRWKRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPTGCSKIMNWHLHLDAHNTDYPKSWLLHKNLDAVIPVNLPVIHVDASLDRYYFNFRPVALPRFVPWGEKGSLEQGRGNIDQVASGSIVSDGATGGKFDVLTKLFLTYGLYQN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0491 483 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Lele03g0491 483 FunFam Glycosyltransferases 157 399 - -
Lele03g0491 483 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 402 IPR029044 -
Lele03g0491 483 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 405 IPR005027 GO:0015018|GO:0016020
Lele03g0491 483 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
Lele03g0491 483 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 157 404 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0491 Lele-ChrLele03 2868847 2871856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0491 1 406 Glycosyltransferase AT1G27600 61.614 3.00e-172 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0491 03 2868847 2871856 Lele03g0491 03 2868847 2871856 ECH
Lele01g0483 01 2855623 2858580 Lele03g0491 03 2868847 2871856 hybridization
Lele02g0467 02 2817180 2819534 Lele03g0491 03 2868847 2871856 hybridization