Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0467 ATGGCGTCGTTCCGACGGACTTTGTCGCCGGCGCACCCCGATTGGCAGTACCAAAACGGTGTTGGCTCGCTTTCAGTTTCCTCTCCTCATCACAAGTTTTCTCCTAGTGCTAAGTATGCGTCGCCATTACCAGTGTTGTCTGTGTACGTAGCCAGTTTGCGGAGGTTTCTTGCTGGGTCTGTTGTGTGGCGGTGTGCTCGGAAAGGGCAATGGAGAAGAGCATTGTTTAGCTGTTTGATCTTTTTCTTCTTAGGTTTCTTATGGGGTATGTTTCCTATCGGTCACGTTGTCGATGACATTCGCCGTCAGGATGTCTCATTTGAGATCAAGCCTCCTAGCGTAAATGCAGAATTAGTCCCTGACGAGGCTTTTGTGATTAATCCAGGGGGTTTGAGTGTCGATGAGCATAGTGCTACCGATGATACGCTCGATTTTGTGCCGAGGAAGCACTTGATTGTGGTGACTCCCACATATAATCGGGCGTTTCAGGCCTATTTTTTAAACAGGCTGGGTCACGTGCTCAGGCTCGTACCTCCGCCTGTTTTGTGGATTGTAGTGGAAATGAATTCAGCTTCTATGGAAACTGCTGAAATACTGAGGAAAACTGGTGTGATGTATAGGCATTTGGTTTGCACTAAGAACTTCACAAATGTGAAGGACAGAGGAGTTCATCAAAGGAATACAGCGTTGGAGCACATTGAGCGCCATAGACTAGATGGGATTGTATACTTCGCGGATGACGATAATATATATTCTCTCGAGTTGTTTGAGACCTTGAGAGACATAAGACGCTTTGGTACTTGGCCTGTTGCCATGCTTGCACAAAGCAAAAACAAGGCCATCTTGGAGGGTCCAGTATGCAATGCAAGTCAAGTGATTGGGTGGCATACAAATGAGAAAAGTAAAAGAGTTCGTAGATTTCATGTTGATATGTCAGGATTTGCTTTTAACAGCACAATCTTGTGGGATTCTAAAAGATGGAAGCGCCCTACATCAAATCCTATTCGCCAATTAGACACAGTGAAGGAGGGTTTCCAAGAGACCACGTTTATGGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCATCTACTGGTTGCTCCAAAATAATGAATTGGCATCTCCATTTGGATGCTCATAATACAGATTATCCCCAGGGTTGGCTACTACAGAAAAGCCTAGATGCTGTCATCCCTGTCAAGTAG 1209 0.4533 MASFRRTLSPAHPDWQYQNGVGSLSVSSPHHKFSPSAKYASPLPVLSVYVASLRRFLAGSVVWRCARKGQWRRALFSCLIFFFLGFLWGMFPIGHVVDDIRRQDVSFEIKPPSVNAELVPDEAFVINPGGLSVDEHSATDDTLDFVPRKHLIVVTPTYNRAFQAYFLNRLGHVLRLVPPPVLWIVVEMNSASMETAEILRKTGVMYRHLVCTKNFTNVKDRGVHQRNTALEHIERHRLDGIVYFADDDNIYSLELFETLRDIRRFGTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNEKSKRVRRFHVDMSGFAFNSTILWDSKRWKRPTSNPIRQLDTVKEGFQETTFMEQLVEDESQMEGSSTGCSKIMNWHLHLDAHNTDYPQGWLLQKSLDAVIPVK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0467 402 CDD GlcAT-I 151 380 IPR005027 GO:0015018|GO:0016020
Lele02g0467 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 150 395 IPR029044 -
Lele02g0467 402 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 396 IPR005027 GO:0015018|GO:0016020
Lele02g0467 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 150 394 IPR029044 -
Lele02g0467 402 FunFam Glycosyltransferases 150 392 - -
Lele02g0467 402 Pfam Glycosyltransferase family 43 170 378 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0467 Lele-ChrLele02 2817180 2819534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0467 1 402 Glycosyltransferase AT1G27600 62.010 1.03e-175 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0467 02 2817180 2819534 Lele02g0467 02 2817180 2819534 ECH
Lele02g0467 02 2817180 2819534 Lele03g0491 03 2868847 2871856 hybridization
Lele02g0467 02 2817180 2819534 Lele04g0488 04 2940589 2943227 hybridization