Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0490 ATGGACCATTATAAATGGTTTGACATCCTGAAGGATGCAAGTGTGGTCCATAAGGCTTTTATGTTGGAATTTGCAAATGTCTTTTTAGTTATCACTACTGCTATTTTGCATGTCGTGCTGTCAGTTGAATGCAACATATTGCCATTGAAAAGAATTCAATTATTTCATGTGACTGAATTTCTTTTGGGTGACCTTCAGTTCATGATGGACTTGAGGTTGATGATGGGTTTTGAGGGGGAAACTAATAATACTGCAGTGGAGGTGACACCAAAAACAGCATTGGGGTTTAGTTTGCTTCCCAGGGTAGTCTGTTTCATCTGGAACTTCATGGTTCTGAGGTTTTATTTGAGTTTTGTGGACACTGTTAATGCAAGGAAGGATTTGAAGTATTGTCTTGCAGCCATAGCAAGGAAAAGGCCACAACACTGCAATACTGTTCTTCCCGCATTGTTCGATTTTTATCCAAATTTTCAAACAGTAAAATCAAGAGAAAGATTGGTAAGGAGCCTGCGAGCTATCAATGCAGGGGATGCTGCTGAGCAAGTCATTCGGCAAGTTGACAAATTAATTAGAAATGGTGATCGCTCGACTTATGATGTTCGAACTAGCAAGGATGATTACCTATCAACGCAGACACCAGTTTCAGGGGAATTATCTAGAAAAAGACCAATGCCCGTGGATAAAGAACAACTGACCAATGGTCATGAGGTCATCTCTAAGCGAATTCATTCTTTCCCTGGCCCATGCTCTCCTTTATCTGTTCAAATACTTGATTCTGAGCATGATGTAAACGCTACAAGTGAACTATCCTCTAATGTTCCTGTGCCGGATAGTGAACTATCTGCTGTGGAGCAAATGATTGCTATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATCCATCCTGATTTGTTAGCTGATATTGTCATTACTAACATGAGGCACTGGCCTAAGACACCGCGATCATTAACAAGGCTTGGAGATCTACCAGTAACACAAGCTGATACCCAACGCAGTCAATTGCGAGCTGTAGCATCTGCACCCATAAATTCTGTTCAATCTTCTGCTATTACAGCTCAAGCTTCATTCCCTTCAGCTACAGCCACGGCCACTGTCACATCACTATCTGATGCCTCTAATGTCAATAATCTGCTTGCTGATTCCAAACGTGATCCACGCAGGGATCCTCGTCGCCTGGATCCTAGGCGTGTGGCAGTAAATGCTGCAGGGACAGCCATATCTGTTATGGAAGATACTAGTTCTGTGAAATCAGAGTTTGATGAATCTTTATCTTTGAGTAAGCCTGTTTCACATTCCGTTGTGACCACTATGGACAATGCTCCAGCACACCTAACAGCCAATATCAAAAGTGAAGATATCATCTCTGAAGGTCCACCAGTTTCAGCACCTGAAAAACCAATTACCAAGACGGAGATTCAAGAGAAGCCCAGAGATATTGACCGGAGTCCAGAAGAAAATGTTCTTTTAGATCCCCCGCACTTTGTTGCTGATGTTATAGCTGAGGATCTAACTACAGTGAATCTTTTAGATACTGAGGCAAAAGGGACCAATTCAACTATACCAGAATATGATCAGTTTTCTCCAGATGCTACATCTGCATCTACATCAGAAGATACCTGTCTGGAATTACCACAGCTTCCACCATATGTTGAACTGTCCAAAGATCATGAAAGTAACATTAAACATAAGGCAATTAAGCATCTTATTGAGTCATACAAGCATTTGCATGTGACAGATTTTCAGCAGTTTTGCATGCCATTACTTGCCCGAATGGTAGCTCAGATTGATGATGATGAAGAGTTTAGTTTGATGCTGCAAAAACATGTCCTGGATGACCAATGGCGGAAGGGCCATGAACTTGTATTGCATGTTTTGTTCCATCTGCACTCCTGTGTTATGCTGGATTCAATTCCAAACTCTTCATCTGCTGCTGTTCTGTATGAAAATTTTCTCTTGGGGGTGGCCAAATCTGTGTTGGAGTTTTTCCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTGCCGCTTTTGCCTGAACCTGCGTTGAAAGTTTTGAATGATCTCTGCTATTCTAGTGTTCTTGATCGTCATGGTAAAGTTGTCCGTGACATTGAACGTGTAACTCAAGGCCTTGGTGCGATATGGAGTTTGATATTGGGGCGTCCACAATATCGGCAGGCATGCTTGGATATAGCGTTAAAGTGTGCTGTTCACCCCCAGGATGAGATTAGAACAAAAGCTATTCGGCTGGTGGCAAACAAGCTCTATCAGCTGAGCTACATATCAGAAGATGTTGAACAGTTTGCTAAACAGATGCTTCTGTCTGCTGTAGACCAGAAAGTCTTAGATATGGGTCTTTCTGAATCTGGACCTATTGAACAAGGAGTTGACGCAGAGATTGGAATTCAGGAAACACCAGGTCCACTGCAAGTTTCCGTATCCACCACATCTGAAAATGACCCCTCTAAACTTGCTAAACCAGTGGCTCCAAATGTTGCATCTGTGTCATTCTCTGAAGCTCAACGTCTCATATCATTGTTTTTTGCTTTATGCACAAAGGCCATTCATCGTCACATTCCTATTCTTTTGAGGGCCTTAGGGCAATCCTATTCTAAAGTGTTGCAAATATTGATGCAAGAAACGACGCAATCTGCTGATCTGATAGCTACTGTTAAGCATTTATATGAAACTAAATTAAGGGTATGCCTTGACAGCATTCCCGAATTCTCCTCTGATGCTTACATTTTTGGATATATAATTATCCCTAATAGTTCTGTGCTGCAGGATGTTTCAATTCTTGTTCCCTTTCTTCCATCGCTTTCCAAAAATGAGGTTTTACCAATATTCCCTCGGCTTCTTGATCTTCCTTTGGAGAAGTTCCAAATGGCACTTGCTCATGTACTACAGGGTTCTGCTCATACAGGCCCAGCTTTGACACCTGTAGAAGTGCTGGTTGCTATCCATGGAATTGTTCCTGAGAAAGATGGCATTGCACTTAAGAAGGCATGGTTCTCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGCAAAAGCATTAAACCAGATGGTTGATCAAACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCAGTACTGGTTGATTGTGTTATGGAGATATTATCGAAACTTGTTAGTAAACAGGTGTGGCGCATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTCTATCAGACTCAGCCGCGTTCTTTTCATGTATTATTGCAGTTGCCGCCTCCACAACTAGAAAGTGCTCTCAACAAACATGCAAATCTCAGAGGTCCTCTTGCTTCTTACGCCAGTCAACCCACTGTAAAATCTTCGCTACCTAGGTCAACATTAGTTGTGCTTGGTCTTGCAAATGAAAAACAAATGCAGCAACATCCATTGAACCCTTCTGACACAAGTTCTTCAGTTCCCGGAGCAACTCTGACATGA 3546 0.4191 MDHYKWFDILKDASVVHKAFMLEFANVFLVITTAILHVVLSVECNILPLKRIQLFHVTEFLLGDLQFMMDLRLMMGFEGETNNTAVEVTPKTALGFSLLPRVVCFIWNFMVLRFYLSFVDTVNARKDLKYCLAAIARKRPQHCNTVLPALFDFYPNFQTVKSRERLVRSLRAINAGDAAEQVIRQVDKLIRNGDRSTYDVRTSKDDYLSTQTPVSGELSRKRPMPVDKEQLTNGHEVISKRIHSFPGPCSPLSVQILDSEHDVNATSELSSNVPVPDSELSAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHWPKTPRSLTRLGDLPVTQADTQRSQLRAVASAPINSVQSSAITAQASFPSATATATVTSLSDASNVNNLLADSKRDPRRDPRRLDPRRVAVNAAGTAISVMEDTSSVKSEFDESLSLSKPVSHSVVTTMDNAPAHLTANIKSEDIISEGPPVSAPEKPITKTEIQEKPRDIDRSPEENVLLDPPHFVADVIAEDLTTVNLLDTEAKGTNSTIPEYDQFSPDATSASTSEDTCLELPQLPPYVELSKDHESNIKHKAIKHLIESYKHLHVTDFQQFCMPLLARMVAQIDDDEEFSLMLQKHVLDDQWRKGHELVLHVLFHLHSCVMLDSIPNSSSAAVLYENFLLGVAKSVLEFFPASDKSFSRLLGEVPLLPEPALKVLNDLCYSSVLDRHGKVVRDIERVTQGLGAIWSLILGRPQYRQACLDIALKCAVHPQDEIRTKAIRLVANKLYQLSYISEDVEQFAKQMLLSAVDQKVLDMGLSESGPIEQGVDAEIGIQETPGPLQVSVSTTSENDPSKLAKPVAPNVASVSFSEAQRLISLFFALCTKAIHRHIPILLRALGQSYSKVLQILMQETTQSADLIATVKHLYETKLRVCLDSIPEFSSDAYIFGYIIIPNSSVLQDVSILVPFLPSLSKNEVLPIFPRLLDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKAWFSCFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDCVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLRGPLASYASQPTVKSSLPRSTLVVLGLANEKQMQQHPLNPSDTSSSVPGATLT 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0490 1181 MobiDBLite consensus disorder prediction 1160 1181 - -
Lele03g0490 1181 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 160 920 - -
Lele03g0490 1181 Pfam Symplekin tight junction protein C terminal 949 1124 IPR022075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0490 Lele-ChrLele03 2854555 2867937 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0490 03 2854555 2867937 Lele03g0490 03 2854555 2867937 ECH
Lele01g0481 01 2836043 2854733 Lele03g0490 03 2854555 2867937 hybridization
Lele02g0466 02 2802605 2815689 Lele03g0490 03 2854555 2867937 hybridization