Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0449 ATGGTCCGCTCCCTTCACTTGTTAGGCCCTTGTATTCCGTCGTCCACGTTTTTTCCCTCCAATACGGTGCTTCGTTTTGGAGGGTTGACGTGTACAATTTCAATTGCCGCAGATGAGGAGGACCCGCTCCTTTGTCTTCATCACCATCGTTTCCGTTGCCTTGCATTCCTGACTCACCATTTGGAAGACAGACAGAAACGGACAAACGGAGAGGATCTCTCTGTTTTCACTTCCTCGCTTTCTCCTATTTCCTCTTTTCTCATTTCATCCTCTCTTTTCTTTCCGATTTCTGGCAAGGGAGATGGCGGTACTTCTCTACCCTCTTCTCAGCCTGGGCCACCAGAGCATCAGCGTTCGCGTGGCAGCAATGGCAATACGATTTTCAAGAGTGGGCTACTTTCCATATCTTCTAAAGGAATTGGATGGACATCTTGGAAGAAAAGGTGGTTTGTTTTAACACGCACTTCACTGGTTTTCTTCAGAAGTGATCCAAATGTGGTTCCTCAGAAGGGGGCCGAAGCAAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTGGCTTTTCCTGATGGACGAGCTTTCACACTCAAGGCTGATACTGCAGAGGATTTACATGAATGGAAGACTGCACTTGAGAATGCTTTGGCGCAAGCCCCGGGTGCTTCTGATGTAGCAGGGGAAAATGGTATCTTCAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTCTGTCAGAGTGCTAATATTTCTTGAAACCGATAATGCTGAGTTCTGTTTGTTTTCTGCGAAGGATGTAGAACCAGTAAAATCTAAAACAGCTATTGGCCGGCCAATTTTACTTGCTCTAGAGGATGATGATGGAGCTCCATCTATTTTGGAGAAAGCCCTCAGGTTCATAGAAGAGCATGGTGAGTTTTATGTTTTTGTTTCTTTGAAGAATTCATAAGAGAGTGGATCGGGGAGCGAGGAGGGTACTGAAGATGATGAATCTTATGATGATGAAGATTATGATGATGAGTGTGATGAAGAATCCATACAAGAGTCCGATGCAGATGCAGAGGGAAGTGAGACTGAAGACTCAGGGGGCAAGGATGATAAGAACCGTGATCACTCAGGTGACAGTGTAGATCCTAAAGTCAACCAGATACCATCACAGCCAAGTGAAGTCTCACTATCTAAGGATGTCGACGTCAAGAGCCGTGAAAATCTAGCGCGTTCAACCAAGACTGCTCATGCAGAGAAGTCCAGCACACCTGCTAACATGGTTGAAGTTGTTTCCACTGACCAGAGTCCAGCACGTAATTCAAGTTGTCCTATTGACAACAAATCAATAGACATATCTGATGATCCAGCACATGCTGCGAGCAACACATTACTGGGGCGTACATCTTCTAACACAAACCTGCAATCTTATCTGGAAAAACAAACGAAATCCATGCATGAGCGTCGTCTGGCTCTTGAGCAAGATGTGGCTAGACTACGGGAACAGCTGCAAAAGGAGAAGAATTATTCTCCTAGATCCTCATCCAATTCAACCAGTGATGAAAAGACCAAGGCAGACCTTGAGGAAATAACTCTCATAGAAGCAGATCTCTCCAAGTTACGGCAGCGGATTGACGATCTTGGCAGGCGGTTTAATTTACAACATGAGCACACTTCAAATCCTGAAACAAAATTGTATGTTAGTCACTTGAAGAATAAGCTGGATACTGAAGATGCAGTTACTTCTCAGTCTCAGATTGAAAAGTCAAAAAGCAAGGTATCAAACTTCACCAATTCTAGACTGACGAAACTGTCCACCAGACTAAACTTCCTGAAGGAGCGTCGAAATCAAATTCAGCAACCACAGCCACCTCTCAATAATAAGCCTCGAGGATCTGAAACTCATTCTGTATCAAACCCAGAAAAGGGCAGAGCCATGGACAGTTCCCAGCCATCCCAAATTCCAGATAAAGGTTCAGGCAAAGAACCTCAGTCGCTCCAAAATTCAGGCAAGATGAGAAAATCAGAAAGTCAGTCAACCCATCATCCAGATAAATGGAATCCAAATCAATCCTCGGAAAGAGGAAGGTCCGAAGGCCATCAGTCTTATAATGTGGATAAAGGTCGATGA 2163 0.4438 MVRSLHLLGPCIPSSTFFPSNTVLRFGGLTCTISIAADEEDPLLCLHHHRFRCLAFLTHHLEDRQKRTNGEDLSVFTSSLSPISSFLISSSLFFPISGKGDGGTSLPSSQPGPPEHQRSRGSNGNTIFKSGLLSISSKGIGWTSWKKRWFVLTRTSLVFFRSDPNVVPQKGAEANLTLGGIDLNNSGSVVVKADKKLLTVAFPDGRAFTLKADTAEDLHEWKTALENALAQAPGASDVAGENGIFRNDQTDSIDISLDQSVRVLIFLETDNAEFCLFSAKDVEPVKSKTAIGRPILLALEDDDGAPSILEKALRFIEEHGEFYVFVSLKNSXESGSGSEEGTEDDESYDDEDYDDECDEESIQESDADAEGSETEDSGGKDDKNRDHSGDSVDPKVNQIPSQPSEVSLSKDVDVKSRENLARSTKTAHAEKSSTPANMVEVVSTDQSPARNSSCPIDNKSIDISDDPAHAASNTLLGRTSSNTNLQSYLEKQTKSMHERRLALEQDVARLREQLQKEKNYSPRSSSNSTSDEKTKADLEEITLIEADLSKLRQRIDDLGRRFNLQHEHTSNPETKLYVSHLKNKLDTEDAVTSQSQIEKSKSKVSNFTNSRLTKLSTRLNFLKERRNQIQQPQPPLNNKPRGSETHSVSNPEKGRAMDSSQPSQIPDKGSGKEPQSLQNSGKMRKSESQSTHHPDKWNPNQSSERGRSEGHQSYNVDKGR 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0449 720 MobiDBLite consensus disorder prediction 101 125 - -
Lele03g0449 720 Coils Coil 541 561 - -
Lele03g0449 720 ProSiteProfiles PH domain profile. 126 230 IPR001849 -
Lele03g0449 720 MobiDBLite consensus disorder prediction 618 720 - -
Lele03g0449 720 Pfam Leucine-zipper of ternary complex factor MIP1 496 562 IPR025757 -
Lele03g0449 720 Coils Coil 500 520 - -
Lele03g0449 720 SMART PH_update 127 232 IPR001849 -
Lele03g0449 720 MobiDBLite consensus disorder prediction 426 459 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 473 491 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 394 409 - -
Lele03g0449 720 CDD PH 129 225 - -
Lele03g0449 720 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 479 571 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 410 425 - -
Lele03g0449 720 SUPERFAMILY PH domain-like 81 230 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 102 125 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 333 534 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 686 702 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 338 372 - -
Lele03g0449 720 MobiDBLite consensus disorder prediction 373 392 - -
Lele03g0449 720 Gene3D - 115 231 IPR011993 -
Lele03g0449 720 MobiDBLite consensus disorder prediction 618 685 - -
Lele03g0449 720 Pfam PH domain 129 229 IPR001849 -
Lele03g0449 720 MobiDBLite consensus disorder prediction 492 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0449 Lele-ChrLele03 2547114 2558793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0449 03 2547114 2558793 Lele03g0449 03 2547114 2558793 ECH
Lele01g0434 01 2546203 2550984 Lele03g0449 03 2547114 2558793 hybridization
Lele02g0430 02 2491213 2502825 Lele03g0449 03 2547114 2558793 hybridization