Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0422 ATGATATGGCAGGTATCACTATTGCATCTTGCTGATATCACTGAAAAAGGTGTGGAATTTCAGTCACCAGTTGATGGAAAACCAATGCTCTTAACCCCTGAGGAATCTATTCGGATCCAAAACAGAATTGGAGCAGATATTATTATGGCTCTTGACGATGTTGTTAGGACCACTATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACACTCAGATGGATAGACAGATGTATAGCAGTAAATGACTGGGTATTGGAGAAATTTGGTACATCTGCTGTGTTGCCAATCTTATGTAGCTTGGCAGCTCTTGGAAATTTGGTAATGCACATGCTGCCCCAATACTCTCTAGTGTACATCAATATAAACTGTCCTGCTTCATGCTCCTTAGCTGAATGCAGTCTTCTCTTGATTTCACAATTCCCCATAAATAAATTTTCTGTGTTAGTCCAATATAATGCAATCAGGGATATATGTGTCAGAGGCTTGGTGGATCGCAATTTACCAGGTTATGCTATTGGTGGTCTTGCTGGTGGTGAAGATAAAGATTCATTTTGGCTTGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAAGATAATCCACGATATGGAGTACTGAAACTTAAACATAGAACCATGGCTGATGACACTCGTCCCATCGATCCTTCCTGCTCTTGTATGTTCCCGGAAGGGGATGTTCCAGAATGGGTCTGCAATGCTATGGAGGTGGCGGGAATTGACATTTCTTCCTGCTGTGCTCCGTTCTCATCATACCAAGAACACAATTCCCAAAATTATCTTAGGGAGGAAGAGATGGAAATGAAGTCGGGCAGAATTTGCGGTGGAAAAGTGGGTGAAAAGAATCCTTCTCTTGGGGCTACAACCTAA 888 0.4257 MIWQVSLLHLADITEKGVEFQSPVDGKPMLLTPEESIRIQNRIGADIIMALDDVVRTTITGPRIEEAMYRTLRWIDRCIAVNDWVLEKFGTSAVLPILCSLAALGNLVMHMLPQYSLVYININCPASCSLAECSLLLISQFPINKFSVLVQYNAIRDICVRGLVDRNLPGYAIGGLAGGEDKDSFWLVVAQCTAALPEDNPRYGVLKLKHRTMADDTRPIDPSCSCMFPEGDVPEWVCNAMEVAGIDISSCCAPFSSYQEHNSQNYLREEEMEMKSGRICGGKVGEKNPSLGATT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0422 295 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 5 82 IPR002616 GO:0006400|GO:0016763
Lele03g0422 295 SUPERFAMILY tRNA-guanine transglycosylase 27 238 IPR036511 GO:0006400|GO:0016763
Lele03g0422 295 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 153 203 - -
Lele03g0422 295 Gene3D - 3 206 IPR036511 GO:0006400|GO:0016763
Lele03g0422 295 Pfam Queuine tRNA-ribosyltransferase 152 203 IPR002616 GO:0006400|GO:0016763
Lele03g0422 295 Pfam Queuine tRNA-ribosyltransferase 5 81 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0422 Lele-ChrLele03 2412310 2416988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0422 03 2412310 2416988 Lele03g0422 03 2412310 2416988 ECH
Lele01g0410 01 2407231 2412390 Lele03g0422 03 2412310 2416988 hybridization
Lele02g0408 02 2370941 2376519 Lele03g0422 03 2412310 2416988 hybridization