Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0283 ATGGCCACAAGTTTCTCCAGCGCGCTTTCGACCAAAGTACCCATGATGGGTTTCAGTGGCTGCAGAAGGGACTCGAGAAACAGGAAAGCATTTTCCATTTCAGCTCAACAGCAAGCGGAAGTCGAGGAGGAAGTAAAAGTACTGCAAGAACAGGCACAAGCACAATCAAACACTGGCACTCAGAATATGAACCCCAAAGGAGTGAAACCAAGGCCTGTGGAACCACAAGTGAACGTGAAGAGCAAAAACATGAGCAGGGAATATGGAGGACAGTGGCTTAGCTGCGCTACCCGCCATGTGAGGATCTATGCTGCATATATCGACCCTGTCACCTGGGAGTTTGATCAGACCCAGATGGATAAGCTCACCCTTATCCTCGATCCCACCGATGAGTTCGTGTGGAATCCTGATACTTGCAATAAGATTTTCTCTTACTTCCAGGAGCTTGTCGATCATTACGAGGGTGCTCCTTTGACGGAATACACGCTTCGCCTGATTGGTTCAGACATAGAGCACTACATAAGGAAACTACTGTACGATGGGGAAATCAAGTACAACATGAACTCAAAGGTGCTCAATTTCAGCATGGGTAAGCCGCGCATTATGTTCAATAATAATGATCTTCCACCTCAAGAGGCACTTGAGTAA 648 0.4707 MATSFSSALSTKVPMMGFSGCRRDSRNRKAFSISAQQQAEVEEEVKVLQEQAQAQSNTGTQNMNPKGVKPRPVEPQVNVKSKNMSREYGGQWLSCATRHVRIYAAYIDPVTWEFDQTQMDKLTLILDPTDEFVWNPDTCNKIFSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNSKVLNFSMGKPRIMFNNNDLPPQEALE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0283 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 212 IPR018922 GO:0016655
Lele03g0283 215 MobiDBLite consensus disorder prediction 44 74 - -
Lele03g0283 215 MobiDBLite consensus disorder prediction 49 65 - -
Lele03g0283 215 Coils Coil 38 58 - -
Lele03g0283 215 Pfam Cyanobacterial and plastid NDH-1 subunit M 93 201 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0283 Lele-ChrLele03 1555845 1556711 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0283 03 1555845 1556711 Lele03g0283 03 1555845 1556711 ECH
Lele01g0278 01 1560756 1561626 Lele03g0283 03 1555845 1556711 hybridization
Lele02g0264 02 1500999 1507137 Lele03g0283 03 1555845 1556711 hybridization