Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0248 ATGGCAACTGTTCTGTTCATAAACGGTGCTTTTTCTTGGAGTAATTCAAAGCTTTTGCTAACCCCTGCTTCTTCACCTTCAATGGGTTGCTCTTCATCAGAAAATGAAGCTCTAAGAACTAGAGCTGCTTCGGGTACGAAAGGAACTGACTTTGTGAACGGAGAAAACGAGAAGCGTTCAACTTTACTGTGGAACAGAGGAACAATTTTGGCTTCTGCGGTTTCCGTACTGGATTTTCCGAGAGACAGTTTAGCGGCGGTGAAACAAGGTCTGCTAGCAGGAAGGATACCTGGTCTATCTGAGCCTGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAAAAGTCTGGAGGACATGGAGTTGGATGGAGTCCTATTATCCCTTACAAATTTTCAGTGCCTCAAGACTGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGTACAGAGATAGATTTGAGATTTGCAAGCTCAAGGGAAGGACGCTTGTTTGTCATTGTTGCTCCTGTTCTGAGATTTGCTGAGAATCTTGGTGATGATGCCACAATAGAAAAAATAGGCCCTCCCGAAACAGTGATCAATGCGTTTGGTCCAGAAGTGATTGGGGAGAATGTGGAAGGGAAAGTTCTCAGTTACAACGTATCGGAACATGAAGGAAGAACATACTACCAATTTGAACTAGAGCCTCCTCATGTACTTATTACAGCTACTGCAGCCGGCAACCGCCTGTACTTGTTCAATGTGACTGGCAGTGGTCTCCAGTGGAAAAGGCATTACGATGATCTGAAGAGAATATCAAGTTCTTTTCGTGTTGTTTGA 825 0.4448 MATVLFINGAFSWSNSKLLLTPASSPSMGCSSSENEALRTRAASGTKGTDFVNGENEKRSTLLWNRGTILASAVSVLDFPRDSLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYKFSVPQDWEEVPVSIADLGGTEIDLRFASSREGRLFVIVAPVLRFAENLGDDATIEKIGPPETVINAFGPEVIGENVEGKVLSYNVSEHEGRTYYQFELEPPHVLITATAAGNRLYLFNVTGSGLQWKRHYDDLKRISSSFRVV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0248 274 Pfam PsbP 130 273 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele03g0248 274 PANTHER - 24 273 - -
Lele03g0248 274 SUPERFAMILY Mog1p/PsbP-like 122 273 IPR016123 -
Lele03g0248 274 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 127 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0248 Lele-ChrLele03 1357686 1359717 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0248 03 1357686 1359717 Lele03g0248 03 1357686 1359717 ECH
Lele01g0241 01 1376000 1378032 Lele03g0248 03 1357686 1359717 hybridization
Lele02g0235 02 1329792 1331828 Lele03g0248 03 1357686 1359717 hybridization