Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0224 ATGGATGGGCAAGGATCCTTATTGTTGGGATGCGCTGGCACGGGTATCGGTCGAGATGGCAAGGAAAGCTCTTCTCTTGTAAAGCAAACATCAGATGATGGTAAATTGGGAGTCGGAGAGCGAGCTTTCTCTGCCGCGGGTGCCGCCTTTCTCTCCGCAATCATTGTTAATCCTCTCGATGTTGCTAAGACAAGGTTGCAAGCACAGGCTGCTGGTGTCAATTATTCTCATCCTCTTGGTAACATGACCTATCGCATGGCTCATTTCGGACCAAATATGGCACCTGTGGCTGTAAGATTTAAGATGTTCTCCATCATGTACACGGGCAGGAATCCATGGAACAGTATCAATTTGTCCTCCCGAGTGTTTTCGGTACAAAGGAACGCTGGATGTTCTCTTCAAAATTGTACAACAGTCATATCCTTGCATGTGCTGTTTTCTCTTCTTATCTTTCATGTACCCACTAATCCAAGTGTGGTTTTGCAGGAAGGATTTGCTAGACTATGGCGCGGAACAAATGCCAGCCTAGCACTTGCTGTACCAACTGTAGGGATTTACCTTCCTTGCTATGACATATTCCGCAACTGGTTGGAGGAATTTGCAGCCAAAAATGTTCCATCCACAATTCCTTATGTACCCTTAGTGGCAGGCTCCCTGGCACGCTCTCTAGCTTGTGCAACTTGTTATCCTATCGAGTTGCTAGAACGCGCATGCAGACTTATCTTCAACTTTGAATTATGGCTGGATGGTGACCCTTTCTTTGCTGGTGCCTTGACCTTATGCATTTGCAGTGGAATTAGATTACTTGTAGCTTTTGAAGAGATTCAAATTGGTAGAAAGCCTCCTGGAGTGTTCCAGACTCTCTTGGGTGTTGTCTCACAAGTAAATGGCACAAATACTCTACAGAACAGCTGTACGTGGTTAAGTTTACTGTTGATTGACATAGATTTCGCAAGGTTATGTGTCTTATGGACTGGCATGGGTTCTCAACTTGCCCGTGATGTCCCCTTCTCTGCCATTTGCTGGTCAACACTTGAACCGATGAGGAGAAAACTACTTAATCTGGTTGGAGGCGATGAAGCCAATGCAATGGTTGTCCTTGGTGCAAATTTTTCGGCTGGTTTTGTTGCAGGAAGCCTTGCAGCTGTTGCCACATGTCCGTTAGATGTTGCGAAAACTCGAAGGCAGATTGAGAGGGATCCAGCCAGGGCATTGAGAATGACTACAAGGCAGACACTAATGGAGGTTTGGAGGGAAGGAGGTTTAAAGGGTCTCTTTACAGGGGTTGGTCCACGAGTTGGACGAGCAGGGCCCTCCGTTGGAATTGTGATTTCGTTTTATGAAGTTGCAAAGTATGTTCTACATAAACCAATACGCGAGATCATGATAAATATGAGATCGGATTCCTTTATGTTTTGGGTCCTTGTTTTTGTTTTTTCCTCCGGTGGCAATCATTCCACCTGA 1464 0.4563 MDGQGSLLLGCAGTGIGRDGKESSSLVKQTSDDGKLGVGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVNYSHPLGNMTYRMAHFGPNMAPVAVRFKMFSIMYTGRNPWNSINLSSRVFSVQRNAGCSLQNCTTVISLHVLFSLLIFHVPTNPSVVLQEGFARLWRGTNASLALAVPTVGIYLPCYDIFRNWLEEFAAKNVPSTIPYVPLVAGSLARSLACATCYPIELLERACRLIFNFELWLDGDPFFAGALTLCICSGIRLLVAFEEIQIGRKPPGVFQTLLGVVSQVNGTNTLQNSCTWLSLLLIDIDFARLCVLWTGMGSQLARDVPFSAICWSTLEPMRRKLLNLVGGDEANAMVVLGANFSAGFVAGSLAAVATCPLDVAKTRRQIERDPARALRMTTRQTLMEVWREGGLKGLFTGVGPRVGRAGPSVGIVISFYEVAKYVLHKPIREIMINMRSDSFMFWVLVFVFSSGGNHST 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0224 487 Gene3D Mitochondrial carrier domain 21 93 IPR023395 -
Lele03g0224 487 Pfam Mitochondrial carrier protein 369 456 IPR018108 -
Lele03g0224 487 Pfam Mitochondrial carrier protein 36 77 IPR018108 -
Lele03g0224 487 ProSiteProfiles Solute carrier (Solcar) repeat profile. 365 453 IPR018108 -
Lele03g0224 487 SUPERFAMILY Mitochondrial carrier 44 448 IPR023395 -
Lele03g0224 487 Gene3D Mitochondrial carrier domain 151 457 IPR023395 -
Lele03g0224 487 PANTHER FI19922P1-RELATED 320 456 IPR045315 GO:1990542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0224 Lele-ChrLele03 1223573 1228313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0224 323 457 Organic Solute Cotransporters AT3G53940 28.777 1.73e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0224 03 1223573 1228313 Lele04g0218 04 1297710 1302226 ECH
Lele03g0224 03 1223573 1228313 Lele03g0224 03 1223573 1228313 ECH
Lele01g0218 01 1244133 1253602 Lele03g0224 03 1223573 1228313 hybridization
Lele02g0216 02 1199867 1204717 Lele03g0224 03 1223573 1228313 hybridization