Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0218 ATGCCTTCTGGACCAACCTTGGTGGCTGGAATGGATGGGCAAGGATCCTTATTGTTGGGATGCGCCGGCACGGGTATCGGTCGAGATGGCAAGGAAAGCTCTTCGCTTGTAAAGCAAACATCAGATGATGGTAAATTGGGAGTCGGAGAGCGAGCTTTCTCTGCCGCGGGCGCCGCCTTTCTCTCCGCAATCATTGTTAATCCTCTTGATGTTGCTAAGACAAGGTTGCAAGCACAGGCTGCTGGGGTCAATTATTCTCATCCTCTTGGTAACATGACCTACCGCATGGCTCATTTCGGACCAAATATGGCACCTGTGGCTGAATCCATGGAACAGTATCAATTTGTCCTCCCGAGTGTTTTCGGTACACGGTACAAGGGAACGCTGGATGTTCTCTACAAAATTGTACAACAGGAAGGATTTGGTAGACTATGGCGCGGAACAAATGCCGGCCTAGCACTTGCTGTACCAACTGAATTTGCAGCCAAAAATGTTCCATCCACAATTCCATATGTACCCTTAGTGGTAGGCTCCCTGGCACACTCTCTAGCTTGTGCAACTTGTTATCCTATTGAGCTTGCTAGAACGCGCATGCAGGGATTAATCTGCAACTTGTTTGTTGGTCAACTCTGTTTAAGGTTGCTTTTGCTTATTGTTCCTGTGGTCTGCCTGGTTTGCTTTTTTCCGAACATTTCACTTGTACCTAGTCAGTGTTGCCATGATGTTCGATATTTCAATTCCAATGGGAAAGACTTATCTTCAACTTTGAATTATGGCTGGATGGTGACCCTTTCTTTGCTGGCTTTTAAAGAGATTCCAATTGGTAGAAAGCCTCCTGGAGTGTTCCAGACTCTCTTGGTGCAAGGTTATCGTGTTGTATGGACTGGCATGGGTTCTCAACTTGCCCGTGATGTCCCCTTCTCTGCCATTTGCTGGTCAACGCTGGAACCGATGAGGAGAAAACTTAATCTGGTTGGAGGCGATGAAGCCAATGCAATGGCTGTCCTTGGTACAAATTTTTCGGCTGGTTTTGTTGCAGGAAGCCTTGCAGCTGTTGCCACATGTCCGTTAGATAGTGATCCAGCCAGGGCATTGAGAATGACTACAAAGCAGACACTAATGGAGGTTTGGAGGGAAGGAGGTTTAAAGGGTCTCTTTACAGGGGTTGGTCCACGAGTTGGACGAGCAGGGCCCTCCGTTGGAATTGTGGTTTCGTTTTATGAAGTTGTAAAGCAATCATTCCACCTGACCTTGGTTGAGAATCTTGGAGATTTCTGGGAAAGCTTTTGCGGAAAGCCCAGATCTCCACCGCCACAACGTGGAATTCTTGCTGCTAAACTACAGCCATTTTGTTTATAG 1359 0.4724 MPSGPTLVAGMDGQGSLLLGCAGTGIGRDGKESSSLVKQTSDDGKLGVGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVNYSHPLGNMTYRMAHFGPNMAPVAESMEQYQFVLPSVFGTRYKGTLDVLYKIVQQEGFGRLWRGTNAGLALAVPTEFAAKNVPSTIPYVPLVVGSLAHSLACATCYPIELARTRMQGLICNLFVGQLCLRLLLLIVPVVCLVCFFPNISLVPSQCCHDVRYFNSNGKDLSSTLNYGWMVTLSLLAFKEIPIGRKPPGVFQTLLVQGYRVVWTGMGSQLARDVPFSAICWSTLEPMRRKLNLVGGDEANAMAVLGTNFSAGFVAGSLAAVATCPLDSDPARALRMTTKQTLMEVWREGGLKGLFTGVGPRVGRAGPSVGIVVSFYEVVKQSFHLTLVENLGDFWESFCGKPRSPPPQRGILAAKLQPFCL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0218 452 ProSiteProfiles Solute carrier (Solcar) repeat profile. 46 172 IPR018108 -
Lele01g0218 452 ProSiteProfiles Solute carrier (Solcar) repeat profile. 334 413 IPR018108 -
Lele01g0218 452 PANTHER FI19922P1-RELATED 38 415 IPR045315 GO:1990542
Lele01g0218 452 Pfam Mitochondrial carrier protein 338 414 IPR018108 -
Lele01g0218 452 Pfam Mitochondrial carrier protein 46 159 IPR018108 -
Lele01g0218 452 Pfam Mitochondrial carrier protein 173 323 IPR018108 -
Lele01g0218 452 Gene3D Mitochondrial carrier domain 30 201 IPR023395 -
Lele01g0218 452 Gene3D Mitochondrial carrier domain 275 444 IPR023395 -
Lele01g0218 452 PRINTS Mitochondrial carrier protein signature 61 79 IPR002067 GO:0055085
Lele01g0218 452 PRINTS Mitochondrial carrier protein signature 177 199 IPR002067 GO:0055085
Lele01g0218 452 SUPERFAMILY Mitochondrial carrier 51 409 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0218 Lele-ChrLele01 1244133 1253602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0218 276 437 Organic Solute Cotransporters AT3G55640 28.409 1.71e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0218 01 1244133 1253602 Lele02g0216 02 1199867 1204717 ECH
Lele01g0218 01 1244133 1253602 Lele01g0218 01 1244133 1253602 ECH
Lele01g0218 01 1244133 1253602 Lele03g0224 03 1223573 1228313 hybridization
Lele01g0218 01 1244133 1253602 Lele04g0218 04 1297710 1302226 hybridization