Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0216 ATGGTGGATTCAGAGCGAATCCAAAATCAATGGATGCCTTCTGGCCAAACCTTAGTGGCTGGAATGGACGGGCAAGGGTCCTTATTGTTGGGATGCTCCGGCACGGGCATCGGTCGAGATGGCAAGGAAAGCTCCACTCTTATGAAAGAAACATCAGATGATGGTAAATTGGGAGTCGGAGAAAGAGCTTTTTCTGCCGCGGGCGCCGCCTGTCTCTCCGCAATCATTGTTAATCCTCTTGATGTCGCTAAGACAAGGTTGCAAGCACAGGCTGCTGGGGTCAATTATTCTCATCCTCTTGGCAACATGACCTATCGCATGGCTCATTTCGGACCAAATATGTTGTTTGCAGATTTAAGATGCTCTCCATCATGTACACGGGCAGGAATCCATGGAACAGTATCAATTTGTCCTCCCGAGTGTTTTCGGTACAAAGGAACTCTGGATGTTCTCTACAAAATTGTACAACAGGAAGGATTTGCTAGACTATGGAGAGGAACAAATGCAGGCCTAGCACTTGCTGTACCAACTGTAGGAATTTACCTTCCTTGCTATGACATATTCCGCAACTGGTTGGAGGAATTTGCAGCCAAAAATGTTCCATCCATGATTCCATATGTACCCTTAGTGGCAGGGTCCCTGGCACGCTCCCTAGCTTGTGCAACTTGTTATCCTATTGAGCTTGCTAGAACGCGCATGCAGGCTTTTAAAGAGACTCAAATTGGTAGAAAGCCTCCTGGAGTGTTCCAGACTCTCTTGGGTGTTGTCTCACAAGTAAAGAGCACAAATACTCTACAGAACAGCTTGCAAGGTTATCGTGTCTTATGGACTGGCATGGGTTCTCAACTTGCCCGTGATGTCCCCTTCTCTGCCATTTGCTGGTCAACACTTGAACCAATGAGAAGAAAACTTCTTAATCTGGTTGGAGGTGATGAAGCCAATGCAATGGTTGTCCTTGGTGCAAATTTTTCAGCTGGTTTTGTTGCAGGAAGCCTTGCAGCTGGTGCCACATGCCCGTTAGATGTTGTGAAAACTCGAAGGCAGATTGAGAGGGATCCAGCCAGGGCATTGAAAATGACTACCAGGCGGACACTAGTAGAGGTTTGGAGGGAAGGAGGCTTAAAGGGACTCTTTACAGGTGTTGGTCCTCGAGTGGGACGAGCAGGGCCCTCCGTTGGAATTGTGGTTTCATTTTATGAAGTTGTAAAGTATGTTCTACATAACCAATACGCGACATCCTGA 1242 0.4718 MVDSERIQNQWMPSGQTLVAGMDGQGSLLLGCSGTGIGRDGKESSTLMKETSDDGKLGVGERAFSAAGAACLSAIIVNPLDVAKTRLQAQAAGVNYSHPLGNMTYRMAHFGPNMLFADLRCSPSCTRAGIHGTVSICPPECFRYKGTLDVLYKIVQQEGFARLWRGTNAGLALAVPTVGIYLPCYDIFRNWLEEFAAKNVPSMIPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIGRKPPGVFQTLLGVVSQVKSTNTLQNSLQGYRVLWTGMGSQLARDVPFSAICWSTLEPMRRKLLNLVGGDEANAMVVLGANFSAGFVAGSLAAGATCPLDVVKTRRQIERDPARALKMTTRRTLVEVWREGGLKGLFTGVGPRVGRAGPSVGIVVSFYEVVKYVLHNQYATS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0216 413 Pfam Mitochondrial carrier protein 208 305 IPR018108 -
Lele02g0216 413 Pfam Mitochondrial carrier protein 57 193 IPR018108 -
Lele02g0216 413 Pfam Mitochondrial carrier protein 321 408 IPR018108 -
Lele02g0216 413 Gene3D Mitochondrial carrier domain 41 139 IPR023395 -
Lele02g0216 413 PANTHER FI19922P1-RELATED 47 409 IPR045315 GO:1990542
Lele02g0216 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 191 IPR018108 -
Lele02g0216 413 SUPERFAMILY Mitochondrial carrier 61 401 IPR023395 -
Lele02g0216 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 405 IPR018108 -
Lele02g0216 413 Gene3D Mitochondrial carrier domain 140 412 IPR023395 -
Lele02g0216 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 303 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0216 Lele-ChrLele02 1199867 1204717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0216 153 403 Organic Solute Cotransporters AT3G55640 27.519 1.36e-17 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0218 01 1244133 1253602 Lele02g0216 02 1199867 1204717 ECH
Lele02g0216 02 1199867 1204717 Lele02g0216 02 1199867 1204717 ECH
Lele02g0216 02 1199867 1204717 Lele03g0224 03 1223573 1228313 hybridization
Lele02g0216 02 1199867 1204717 Lele04g0218 04 1297710 1302226 hybridization