Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0158 ATGTATGGGAGTATAGATTTGGTATCCTCAATCATTCAGAGAAAGCTGAGGAAGATAAAGGAAAAGGAGTCAGATCGTGGTTGCCACATGAAGGGTTTCAATAGGTCGAAAGTGAGGGAGCCCGTAACTCCTTTGCCCCTCGATGACACAGAGACAGATACAGAGACAGACACACTTCCCCAGCAGCAGCAGGAGGAACAATTCATTGACGAGGTTGCGCGCACAAAATACTTTGACATGCCACCGTTGACAGTAAGCGAAGCAATTGAGCAGGTGGAAAATGCTGATCATGACTTCTATGGGGAGATCAATATAGTGTACAGAAGGAAAGAAGGAGGCTCATTGCAATCTAATCTAAAGCGCTATTTCTATCGCACAAAACGGGACCTTGTCGTCTTTTCGCGCACAGTCGACGATACCAGTGTTACTCAACGAAGAAGCGACGAAGAATTTGGGGTTCGTCTGCTTCCTGCGACACTTCTTCCAGGATCTGAGGCGACCCCCCATGTTGAAGAGCTCAGTTTAAACCGGACTTTTGTGCCGGAGCAGAACAGAGCATTCTTAGAATCGGAAGAAGAATCTGGAGAAACCCGAGAGTCTGAAAAGAATCAAAGGGAAGAGGAGGGTGAAACTGAACTGAACGGCGGGGAAGGGAAGGGAAATTCACATTACAGTCCTCCAGGGACAGAGTAG 693 0.4747 MYGSIDLVSSIIQRKLRKIKEKESDRGCHMKGFNRSKVREPVTPLPLDDTETDTETDTLPQQQQEEQFIDEVARTKYFDMPPLTVSEAIEQVENADHDFYGEINIVYRRKEGGSLQSNLKRYFYRTKRDLVVFSRTVDDTSVTQRRSDEEFGVRLLPATLLPGSEATPHVEELSLNRTFVPEQNRAFLESEEESGETRESEKNQREEEGETELNGGEGKGNSHYSPPGTE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0158 230 MobiDBLite consensus disorder prediction 186 214 - -
Lele03g0158 230 MobiDBLite consensus disorder prediction 22 46 - -
Lele03g0158 230 MobiDBLite consensus disorder prediction 22 63 - -
Lele03g0158 230 PANTHER 30S RIBOSOMAL PROTEIN 1 113 - -
Lele03g0158 230 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 70 113 IPR032528 -
Lele03g0158 230 Gene3D - 82 118 IPR038416 -
Lele03g0158 230 MobiDBLite consensus disorder prediction 181 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0158 Lele-ChrLele03 849614 853935 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0158 03 849614 853935 Lele03g0158 03 849614 853935 ECH
Lele01g0149 01 865069 868623 Lele03g0158 03 849614 853935 hybridization
Lele02g0154 02 850860 852460 Lele03g0158 03 849614 853935 hybridization