Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0149 ATGCGGGAGCAGAGCCTCAGGCGTATTCCCAGGAGTAGCAGACAAACACGAAAATGGGAGGACGCTATCTACAAAATGTTTCTGAGTGTGTCTCACTCGCCTCCGACACGACTCTTGCTCCACTCGCCTAACCTTTGGGCAAGTCGACAAAATCTGAGGCTACGCCCTGAGATCGAAATGATGACAATATCCCTGACATCAGTGCGTGATGTGCTGCTATTGCGCCCAGAACCAGAAGTAACCGTGCAGTTGACGGATACGGTGAAGCAGCATGTGGAGGAGAAGGTTGGGAAGACAGTTCAGAACCACAGTCACCTGGTTAGGGAGGTGGATGTGAGGTTATTCGTCCGAGGAGGAGGAGAATTTGGGAAAGGACCCCTCCCCAAAAGATGTGAGAGGCATGGGGCGGTGCGGGCCGAGGAAGAAGCAGAGACTATGTATGGGAGTATAGATTTGGTATCCTCAATCATTCAGAGAAAGCTGATGAAGATAAAGGAAAAGGAGTCAGATAGTGGTCGCCACATGAAGGGTTTCAATAGGTCGAAAGTTCTAGCTGGGAATACTTCCGTTGCGCGCACAAAATACTTTGACATGCCACCGTTGACAGTAAGCGAAGCAATTGAGCAGCTGGAAAATGTTGATCATGACTTCTATGGGGAGATCAATATAGTGTACAGAAGGAAAAAAGGAGGTTATGGAGCAATCATGCCCAAAGGAGACGGCAGAGCGGAGAAATTGGAGACACTGGCGGTGGAAACAGCAAGAGAAACCTCCTCCTCAGAAGGAAATGTACTGGGGAAACTTTTTGAAACAACTTAG 819 0.4884 MREQSLRRIPRSSRQTRKWEDAIYKMFLSVSHSPPTRLLLHSPNLWASRQNLRLRPEIEMMTISLTSVRDVLLLRPEPEVTVQLTDTVKQHVEEKVGKTVQNHSHLVREVDVRLFVRGGGEFGKGPLPKRCERHGAVRAEEEAETMYGSIDLVSSIIQRKLMKIKEKESDSGRHMKGFNRSKVLAGNTSVARTKYFDMPPLTVSEAIEQLENVDHDFYGEINIVYRRKKGGYGAIMPKGDGRAEKLETLAVETARETSSSEGNVLGKLFETT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0149 272 CDD RaiA 82 167 IPR003489 GO:0044238
Lele01g0149 272 Gene3D - 200 242 IPR038416 -
Lele01g0149 272 PANTHER 30S RIBOSOMAL PROTEIN 81 247 - -
Lele01g0149 272 Gene3D - 80 179 IPR036567 -
Lele01g0149 272 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 189 233 IPR032528 -
Lele01g0149 272 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 82 167 IPR003489 GO:0044238
Lele01g0149 272 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 82 173 IPR036567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0149 Lele-ChrLele01 865069 868623 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0149 01 865069 868623 Lele01g0149 01 865069 868623 ECH
Lele01g0149 01 865069 868623 Lele03g0158 03 849614 853935 hybridization
Lele01g0149 01 865069 868623 Lele04g0150 04 852869 854339 hybridization