Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0148 ATGCTTGGTCCTGAAAATGTGAGGGAGGCCAAGAGGGTGATGGCAGGTGAAGACTTTGCATATTATCAACGAGTGATTCCTGGAGCAATGTTTGGCATAGGGATTGGAAACGAGGAAGTGGGATCAGTTCACTCTCCACACTCTCCTTTCTTCTTTCTTGATGAGAAAATAAGATTTGTCTTATTTTTGGTGGTTCATATAGACAGGGTAGGAAAAGGATATTCATTCGACAAAGAGGCCAAAAGGCCAGATTTCTCTGATCCTCAAGTTTCATCTATCCCAATTATACCTCATGAAAATGGGAAAGCCATTGCTTTAGCTCTGATATGGTTCGTGGAGCATTTTGATTTGCTTAATAGCACAGCAATTAGTGATGTGGAGAAACTAGGTGGCCACACCAGAGGCTTACACGTAGGAACAAAACACACTTCAATGGGTGAAGAAGCTAAACAGGAACAACCTAAGGCAGAGGCCAAGCCAGAGGAGAAGAAAGAAGAGAAAACAGAGGAAAAACCAGCGGAGGAGAAGAAGGAAGAGAAAGCGGAGGAGAAGCAGGAAGAGGAAAAACCAGCAGAGGAGGAGAAGGAAGAGCCAAAGCCACCATCACCGTGCGTTCTGTCTGTGGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAGAGATCTATTATGAAAATGAGAGGAGTTGAGGGGGTGGTCATTGATATGGCTAAGAATGAAATAACCATAAAAGGGATAGTGGAACCACAAGCAATCTGCGATAAAATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCATTGCCCGCAGCAGAAGGAGAACCTATACCAGAAGTTGTTACTTCTCAGGTTAGTGGACCAGTAACCGTGGAACTTAATGTAAACATGCACTGTGAGGCCTGTGCTGAGCAACTCAAGAGGAAGATTCTCAAAATGAGAGGAGTGCAAACAGCAGTGACAGAATTAAGCACGGCGAAGGTTACTGTGACAGGGACGATGGATGCGAACAAGCTAGTGGAATATGTGTATAAACGCACCAAGAAGCAAGCGAAAATAGTTCCACAACCAGAGCCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGGAGAGAAACCAGCAGAAGAGGCAAAGGCCGAAGAGAAAAAGGAAGAGAAGAAAGAGGAGGAGAAACCAGCAGAGGAGGACAAGAAGGAAGAAGAGGGTAACAAAGAAGGATCAGGTGAAGACAAGGGCGAGAATAAAGAAGAAAAAGGTGGCGAAGAAAGCAAGGAAGAGGCCAAGAAAGAAGGAGGAGATAACAACGGCGGGGTGGTTATGATTGATGATGAAGGAATTAAGAGGATGATGTATTATTACCAGCAGCCACTCTATTTGATTGAACGAATCCCACCTCCTCAGCTCTTCAGCGATGAAAACCCTAATGCATGCTGCATTTCATAA 1446 0.4433 MLGPENVREAKRVMAGEDFAYYQRVIPGAMFGIGIGNEEVGSVHSPHSPFFFLDEKIRFVLFLVVHIDRVGKGYSFDKEAKRPDFSDPQVSSIPIIPHENGKAIALALIWFVEHFDLLNSTAISDVEKLGGHTRGLHVGTKHTSMGEEAKQEQPKAEAKPEEKKEEKTEEKPAEEKKEEKAEEKQEEEKPAEEEKEEPKPPSPCVLSVDLHCVGCAKKIERSIMKMRGVEGVVIDMAKNEITIKGIVEPQAICDKITKRTRRRAKVISPLPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKRKILKMRGVQTAVTELSTAKVTVTGTMDANKLVEYVYKRTKKQAKIVPQPEPEPEKKEEPKEGEKPAEEAKAEEKKEEKKEEEKPAEEDKKEEEGNKEGSGEDKGENKEEKGGEESKEEAKKEGGDNNGGVVMIDDEGIKRMMYYYQQPLYLIERIPPPQLFSDENPNACCIS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0148 481 Coils Coil 164 197 - -
Lele03g0148 481 SUPERFAMILY HMA, heavy metal-associated domain 286 347 IPR036163 GO:0046872
Lele03g0148 481 MobiDBLite consensus disorder prediction 350 433 - -
Lele03g0148 481 SUPERFAMILY Zn-dependent exopeptidases 2 58 - -
Lele03g0148 481 ProSiteProfiles Heavy-metal-associated domain profile. 297 344 IPR006121 GO:0046872
Lele03g0148 481 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 145 481 IPR044258 GO:0046872
Lele03g0148 481 Gene3D - 202 264 - -
Lele03g0148 481 Gene3D - 288 354 - -
Lele03g0148 481 MobiDBLite consensus disorder prediction 141 200 - -
Lele03g0148 481 MobiDBLite consensus disorder prediction 134 203 - -
Lele03g0148 481 Pfam Heavy-metal-associated domain 206 254 IPR006121 GO:0046872
Lele03g0148 481 Pfam Heavy-metal-associated domain 295 344 IPR006121 GO:0046872
Lele03g0148 481 SUPERFAMILY HMA, heavy metal-associated domain 206 259 IPR036163 GO:0046872
Lele03g0148 481 ProSiteProfiles Heavy-metal-associated domain profile. 210 258 IPR006121 GO:0046872
Lele03g0148 481 Gene3D Zn peptidases 1 63 - -
Lele03g0148 481 CDD HMA 205 258 IPR006121 GO:0046872
Lele03g0148 481 CDD HMA 293 353 IPR006121 GO:0046872
Lele03g0148 481 MobiDBLite consensus disorder prediction 350 441 - -
Lele03g0148 481 Coils Coil 377 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0148 Lele-ChrLele03 789112 794585 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0148 03 789112 794585 Lele03g0148 03 789112 794585 ECH
Lele01g0139 01 817452 822737 Lele03g0148 03 789112 794585 hybridization
Lele02g0144 02 808256 814718 Lele03g0148 03 789112 794585 hybridization