Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0144 ATGCACGCGTGCGGGCACGATGCTCACACGACCATGCTACTTGGTGCCTCGAAATTGCTTAATCAACGGAAAGATAGACTTCAGGTGCTTATCGAACCATCAATTCGCCGATGGCCCGGTTCCGAATCACACGAGATTTCTCGAAATCTGTTATCTGATGAATTTCCTCCTTTTCTTTTGGCATTGAAGGGAACTGTACGACTTCTTTTCCAACCTGCTGAGGAGGGAGCTGCTGGTGCCCCTCAGATGATTACAGATGGAGCGCTTAAAGATGCAGAAGCAATTTTCGCTGTGCATGTAGATTATAGAACGCCTACAGGAGCCATAGCATCTATATCTGGGCCTTTCTCAGCTGCTGGCTGTATCTTTGCAGCAAAAATGATAGGACAAGGTGGGCATGCTTCACAACCCCACAAACATGTGGATCCGGTGCTGGCTACATCGTTTGCAATATTGGCACTGCAACAACTTGTCTCAAGAGAATCTGATCCACTTCATAGTCAAGTAGTATCAATTACTTATGTCAAAACCAATGTTGCATTAAATGTGATTCCATCATATGTTGAATTTGGTGGTACTCTAAGGAGTCAGACAACTGAAGGAATGTACCACTTCAGGCAGCGACTAAAGGAGCAGTTCTCCTTAATCTTCGCGTTATTGGTTTTCCCTGTTTTGATTTTCATGGTTGATTTGGGCTGGGAGGACTTCTCTGTAATGTGTATAATGCTGTTAACAGAAGTAATTGAAAGACAGGCAGCTGTGCACAGATGCAGTGCAAATATAGATATGAAAGAAGAAACATCGATCCCATATCCTGCTGTTGTGAATGACAATAAATTGCACCAACATGTGAAGAGGGTTGGTGAACTTATGCTTGGTCCTGAAAATGTGAGGGAGGCCAAGAGGGTGATGGCAGTTCAGTCTCCACAGTCTCCTTTCTTCTTTCTTGATGAGGAAGTCCTTCCAATAGGGGCTGCACTTCACACAGCGATTGCTGAGTCATACTGGGAGGATAACCAACATGCTACTGTACAGACACATCCTCTTCCTACGGTTATGCAAAAGAATATTTGCAGAATTTACCGAACAAAGCCTTATGGCCACAAGTCAACGAGTGACACTTCACCACCTTGTTTATGCAAATCTGAGTCGGTTAGTGATGGAAGTATTATCATTTTCAAAGGTTGGCTTCTTTCTCTCTCTCTGGCCTTTACCATAATCTCTCTCCTTTCTATAAATTTCCGACCCTCTCTACCGCCATCCTTGAGAAATGAAAAGAATTCCCAACAAAGAAATATTGAACCAAGAGCAAAACACACTTCAATGGGTGAAGAAGCTAAACAGGAACAACCTAAGGCAGAGGCCAAGCCAGAGGAGAAGAAAGAAGAGAAAGCAGAGGAAAAGCCGGCGGAGGAGAAGAAAGAAGAGAAAGCAGAGGAGAAGAAGGAAGAGCCTAAGCCACCATCACCATGCGTGCTGTCTGTGGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAGAGATCTATTATGAAAATGAGAGGAGTTGAGGGGGTGGTCATTGATATGGCTAAGAATGAAATAACCATAAAAGGGATAGTGGAACTCCAAGCAATCTGCGATAAAATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCGTTGCCCGCAGCGGAAGGAGAACCTATACCAGAAGTTGTTACTTCTCAGGTTAGTGGACCAGTAACCGTGGAGCTTAATGTGAACATGCACTGTGAGGCCTGTGCTGAGCAACTGAAGAGGAAGATTCTCAAAATGAGAGGAGTGCAAACAGCAGTGACAGAATTAAGCACGGGGAAGGTTACTGTTACAGGAACGATGGATGCGAACAAGCTAGTGGAATATGTGTATAGACGCACCAAGAAGCAAGCGAAAATAGTTCCACAATCAGAGCCTGAACCAGATACGAAGGAAGAACCTAAAGAAGCAGAGAAACCACCAGAAGAGGCAAAGGCTGAGGAGAAAAGGGAAGAGAAGAAAGAAGAGGAGAAACCTGCAGAGGAGGCGAAGAAGGAAGAAGAGGGTAACAAAGAAGGATCTGGTGAAGACAAGGGTGAGAATAAAGAAGAAAAAAATGGCGAAGAAAGCAAGGAAGAGGCCAAGAAAGAAGGAGGAGGAGATAACAATGGGGTGGTTGTGGTTGATGATGAAGGGATTAAGAGGATGATGTATTATTATCAGCAGCCACTCTATTTGATTGAACGAATCCCACCTCCTCAGCTCTTCAGCGATGAAAACCCCAATGCATGCTGCATTTCATAA 2307 0.4426 MHACGHDAHTTMLLGASKLLNQRKDRLQVLIEPSIRRWPGSESHEISRNLLSDEFPPFLLALKGTVRLLFQPAEEGAAGAPQMITDGALKDAEAIFAVHVDYRTPTGAIASISGPFSAAGCIFAAKMIGQGGHASQPHKHVDPVLATSFAILALQQLVSRESDPLHSQVVSITYVKTNVALNVIPSYVEFGGTLRSQTTEGMYHFRQRLKEQFSLIFALLVFPVLIFMVDLGWEDFSVMCIMLLTEVIERQAAVHRCSANIDMKEETSIPYPAVVNDNKLHQHVKRVGELMLGPENVREAKRVMAVQSPQSPFFFLDEEVLPIGAALHTAIAESYWEDNQHATVQTHPLPTVMQKNICRIYRTKPYGHKSTSDTSPPCLCKSESVSDGSIIIFKGWLLSLSLAFTIISLLSINFRPSLPPSLRNEKNSQQRNIEPRAKHTSMGEEAKQEQPKAEAKPEEKKEEKAEEKPAEEKKEEKAEEKKEEPKPPSPCVLSVDLHCVGCAKKIERSIMKMRGVEGVVIDMAKNEITIKGIVELQAICDKITKRTRRRAKVISPLPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKRKILKMRGVQTAVTELSTGKVTVTGTMDANKLVEYVYRRTKKQAKIVPQSEPEPDTKEEPKEAEKPPEEAKAEEKREEKKEEEKPAEEAKKEEEGNKEGSGEDKGENKEEKNGEESKEEAKKEGGGDNNGVVVVDDEGIKRMMYYYQQPLYLIERIPPPQLFSDENPNACCIS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0144 768 ProSiteProfiles Heavy-metal-associated domain profile. 584 631 IPR006121 GO:0046872
Lele02g0144 768 MobiDBLite consensus disorder prediction 420 489 - -
Lele02g0144 768 MobiDBLite consensus disorder prediction 638 720 - -
Lele02g0144 768 CDD HMA 492 545 IPR006121 GO:0046872
Lele02g0144 768 Gene3D - 575 641 - -
Lele02g0144 768 Gene3D - 490 551 - -
Lele02g0144 768 SUPERFAMILY HMA, heavy metal-associated domain 573 633 IPR036163 GO:0046872
Lele02g0144 768 CDD HMA 580 640 IPR006121 GO:0046872
Lele02g0144 768 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 442 768 IPR044258 GO:0046872
Lele02g0144 768 SUPERFAMILY Zn-dependent exopeptidases 61 339 - -
Lele02g0144 768 SUPERFAMILY Bacterial exopeptidase dimerisation domain 123 214 IPR036264 -
Lele02g0144 768 Coils Coil 667 687 - -
Lele02g0144 768 Coils Coil 461 481 - -
Lele02g0144 768 MobiDBLite consensus disorder prediction 638 726 - -
Lele02g0144 768 ProSiteProfiles Heavy-metal-associated domain profile. 497 545 IPR006121 GO:0046872
Lele02g0144 768 MobiDBLite consensus disorder prediction 429 487 - -
Lele02g0144 768 SUPERFAMILY Zn-dependent exopeptidases 1 28 - -
Lele02g0144 768 Pfam Heavy-metal-associated domain 493 536 IPR006121 GO:0046872
Lele02g0144 768 Pfam Heavy-metal-associated domain 582 629 IPR006121 GO:0046872
Lele02g0144 768 SUPERFAMILY HMA, heavy metal-associated domain 493 546 IPR036163 GO:0046872
Lele02g0144 768 Gene3D Zn peptidases 241 349 - -
Lele02g0144 768 Gene3D Zn peptidases 1 189 - -
Lele02g0144 768 FunFam N-acetyldiaminopimelate deacetylase 118 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0144 Lele-ChrLele02 808256 814718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0144 02 808256 814718 Lele02g0144 02 808256 814718 ECH
Lele02g0144 02 808256 814718 Lele03g0148 03 789112 794585 hybridization
Lele02g0144 02 808256 814718 Lele04g0141 04 808154 809980 hybridization