Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0139 ATGGCAGGTGAAGACTTTGCGTATCATCAAGAAATGATTCCCAGAGCAATGTTTGACATATGGATTGGAAACGAGGAAGTGGGATCAGTTCACTCTCCACACTCTCCTTTCTTCTTTCTTGATGAGAAAGTCCTTCCCATAGGGGCTGCACTTCACACAGCGATTGCTGAGTCACACCTAGAAACATTCTACTGTGCAGTAAGATTTGTCTTATTTTTGGTGGCTCATATAGACGGGAGGAAAAGGATATTCATTCGACAAAAAAGGCCAAAAGGCCAGGTGGAGCATTTTGATTCGCTTAATAGCACAGCAATTAGTGATGTGGAGAAACTACCAAAACACACTTCAATGGGTGAAGAAGCTAAACAGGAACAACCTAAGGCAGAGGCCAAGACAGAGGAGAAGAGAGAAGAGAAAACAGAGGAAAAACCAGCGGAGGAGAAGAAGGAAGAGAAAGCGGAGGAGAAGCAGGAAGAGGAAAAACCAGCAGAGGAGGAGAAGGAAGGGCCTAAGCCAGCATCACCGTGCGTGCTGTCTGTGGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAGAGATCTGTTATGAAAATGAGAGGAGTTGAGGGGGTGGTCATTGATATGGCTAAGAATGAAATAACCATAAAAGGGATAGTGGAACCCCAAGCAATCTGCGATAAAATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCATTGCCCGCAGCAGAAGGAGAACCTATACCAGAAGTTGTTACTTCTCAGGTTAGTGGACCAGTAACCGTGGAACTTAATGTAAACATGCACTGTGAGGCCTGTGCTGAGCAACTCAAGAGGAAGATTCTCAAAATGAGAGGAGTGCAAACAGCAGTGACAGAATTAAGCACGGGGAAGGTTACTGTGACAGGGACGATGGATGCGAACAAGCTAGTGGAATATGTGTATAGACGCACCAAGAAGCAAGCGAAAATAGTTCCACAACCAGAGTCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGGAGAGAAACCAGCAGAAGAGGCAAAGGCCGAAGAGAAAAATAAAGAGAAGAAAGAGGAGGAGAAACCAGCAGAGGAGGACAAGAAGGAAGAAGAGGGCAACAAAGAAGGATCAGGTGAAGACAAGGGCGAGAATAAAGAAGAAAAAGATGGTGAAGAAAGCAAGGAAGATGCCAAGAAAGAAGGAGGAGATAACAACGGCGGGGTGGTTATGATTGATGATGAAGGAATTAAGAGGATGATGTATTATTACCAGCAGCCACTCTATTTGATTGAACGAATCCCACCTCCTCAGCTCTTCAGCGATGAAAACCCTAATGCATGCTGCATTTCATAA 1362 0.4457 MAGEDFAYHQEMIPRAMFDIWIGNEEVGSVHSPHSPFFFLDEKVLPIGAALHTAIAESHLETFYCAVRFVLFLVAHIDGRKRIFIRQKRPKGQVEHFDSLNSTAISDVEKLPKHTSMGEEAKQEQPKAEAKTEEKREEKTEEKPAEEKKEEKAEEKQEEEKPAEEEKEGPKPASPCVLSVDLHCVGCAKKIERSVMKMRGVEGVVIDMAKNEITIKGIVEPQAICDKITKRTRRRAKVISPLPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKRKILKMRGVQTAVTELSTGKVTVTGTMDANKLVEYVYRRTKKQAKIVPQPESEPEKKEEPKEGEKPAEEAKAEEKNKEKKEEEKPAEEDKKEEEGNKEGSGEDKGENKEEKDGEESKEDAKKEGGDNNGGVVMIDDEGIKRMMYYYQQPLYLIERIPPPQLFSDENPNACCIS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0139 453 CDD HMA 177 230 IPR006121 GO:0046872
Lele01g0139 453 Gene3D - 260 326 - -
Lele01g0139 453 Gene3D - 174 236 - -
Lele01g0139 453 ProSiteProfiles Heavy-metal-associated domain profile. 269 316 IPR006121 GO:0046872
Lele01g0139 453 ProSiteProfiles Heavy-metal-associated domain profile. 182 230 IPR006121 GO:0046872
Lele01g0139 453 Pfam Heavy-metal-associated domain 267 314 IPR006121 GO:0046872
Lele01g0139 453 Pfam Heavy-metal-associated domain 178 226 IPR006121 GO:0046872
Lele01g0139 453 MobiDBLite consensus disorder prediction 112 171 - -
Lele01g0139 453 MobiDBLite consensus disorder prediction 323 405 - -
Lele01g0139 453 Coils Coil 136 166 - -
Lele01g0139 453 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 136 453 IPR044258 GO:0046872
Lele01g0139 453 MobiDBLite consensus disorder prediction 323 412 - -
Lele01g0139 453 SUPERFAMILY HMA, heavy metal-associated domain 178 231 IPR036163 GO:0046872
Lele01g0139 453 Coils Coil 350 377 - -
Lele01g0139 453 MobiDBLite consensus disorder prediction 105 175 - -
Lele01g0139 453 SUPERFAMILY HMA, heavy metal-associated domain 258 318 IPR036163 GO:0046872
Lele01g0139 453 SUPERFAMILY Zn-dependent exopeptidases 1 60 - -
Lele01g0139 453 Gene3D Zn peptidases 1 66 - -
Lele01g0139 453 CDD HMA 265 325 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0139 Lele-ChrLele01 817452 822737 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0139 01 817452 822737 Lele01g0139 01 817452 822737 ECH
Lele01g0139 01 817452 822737 Lele03g0148 03 789112 794585 hybridization
Lele01g0139 01 817452 822737 Lele04g0141 04 808154 809980 hybridization