Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0957 ATGGCCGAAGAAGGACAAGTCATTGGCTGCCACACCGTTGAGGCCTGGAAGGAGCAGCTTGAGAAGGGCAGCGCATCCAAGAAACTGATTGTGGTGGATTTTACTGCTTCATGGTGCGGTCCATGCCGTTTCATTTCCCCAATTTTGGCAGAGATTGCTAAGAAGATGACCAATGTCATCTTTCTCAAGGTCGATGTGGATGAATTGAAGGCTGTTTCGGAGGAATGGGCCATCGAAGCTATGCCAACCTTCTTGTTCCTGAAAGAAGGCAAATTAGTGGATAAGGTTGTGGGTGCTAAGAAGGAGGAGTTGCAGTTGACCATAAATAAGCATGCAGCTGCCTGA 345 0.4812 MAEEGQVIGCHTVEAWKEQLEKGSASKKLIVVDFTASWCGPCRFISPILAEIAKKMTNVIFLKVDVDELKAVSEEWAIEAMPTFLFLKEGKLVDKVVGAKKEELQLTINKHAAA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0957 114 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Lele02g0957 114 Gene3D Glutaredoxin 1 114 - -
Lele02g0957 114 FunFam Thioredoxin 6 113 - -
Lele02g0957 114 CDD TRX_family 18 103 - -
Lele02g0957 114 PANTHER THIOREDOXIN 7 110 - -
Lele02g0957 114 Pfam Thioredoxin 10 109 IPR013766 -
Lele02g0957 114 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Lele02g0957 114 SUPERFAMILY Thioredoxin-like 6 112 IPR036249 -
Lele02g0957 114 PRINTS Thioredoxin family signature 30 38 - -
Lele02g0957 114 PRINTS Thioredoxin family signature 38 47 - -
Lele02g0957 114 PRINTS Thioredoxin family signature 77 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0957 Lele-ChrLele02 5808112 5809794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0957 02 5808112 5809794 Lele02g0957 02 5808112 5809794 ECH
Lele02g0957 02 5808112 5809794 Lele03g0953 03 5535444 5541842 hybridization
Lele02g0957 02 5808112 5809794 Lele04g0951 04 5865356 5872551 hybridization