Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0777 ATGCACTGTACTCTTGTCGCGGTCACCTTCAAGCTGGCTCAAATTGCCCTTTTCCTTGATCAGCTGCATATGGTGATGTTTGCAGTAGAGTTTGCCCTCATGTGCAATGTAGTTGGAAGGACTTATAACACACCCTCCATGGCAACATTTGAAACAAGTCTTGTGGTATGGAGTTCCATTCACAGTAACCTGTATCATTGCAAAATGTTGATCTCAACTTTTCATGTACTAGTTGCCGGTTCTTTTGAACAATTGGTCGAAGTGTGGCTTGCAGTAAAGGACTCCCTCGAAAGAATTAGAAGGAAGATGGTGTTTGGGCAAGTAGTTATTGGTCCTCCTGGCTCCGGCAAAACAACCTACTGCAATGGCATGTCTCAGTTCCTGAAACTTATTGGAAGGAAGGTTGCAGTAGTTAATCTGGATCCTGCCAATGATTCACTGCCAGATAGCTACGAATGCGCAGTGAATATCGAGGATATTGTGAAATTAAGTGATGTAATGGCGGAACATTCTCTAGGCCCTAATGGGGGCCTTGTGTATTGTATGGACCATCTAGAGAAAAATATTGACTGGTTACAAGCTAAGTTGGAACCCCTTCTGAAAGATCACTATCTACTCTTTGATTTTCCTGGCCAAGTTGAACTATTTTTTCTTCATTCAAATGCCAAGGAGGTCATCATGAAACTCATTAAAAAATTGAACCTAAGGTTGACTGCAGTGCATTTGGTTGATGCTCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGATTCTATCCTTATCAACAATGCTACATCTAGAACTCCCTCACATTAATGTCTTGTCAAAAATTGATTTGATTGAGAGCTATGGAAGGCTAGAGATCCATTCTAACCTCTATATTTTGATGGGTGCAGCATTTAACCTTGATTTCTACACAGATGTGCAAAACTTGTCATATTTACAACGCCATCTTGATCAGGATCCTCGCGCTGTTAAGTACAGAAAACTAACGAAGGAATTATGTCAAGTTATAGAAGACTTCGGTCTTGTAAACTTTACAACCTTAGATATTCAGGACAAAGAAAGTGTTGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGCTGCCATAGAAGCAAGTGCAGTTGAATTCAGCAAGGTTGCTGTTGGCCCTGTTGACTGGGATTATTATAGATATCCTTAG 1203 0.4057 MHCTLVAVTFKLAQIALFLDQLHMVMFAVEFALMCNVVGRTYNTPSMATFETSLVVWSSIHSNLYHCKMLISTFHVLVAGSFEQLVEVWLAVKDSLERIRRKMVFGQVVIGPPGSGKTTYCNGMSQFLKLIGRKVAVVNLDPANDSLPDSYECAVNIEDIVKLSDVMAEHSLGPNGGLVYCMDHLEKNIDWLQAKLEPLLKDHYLLFDFPGQVELFFLHSNAKEVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIESYGRLEIHSNLYILMGAAFNLDFYTDVQNLSYLQRHLDQDPRAVKYRKLTKELCQVIEDFGLVNFTTLDIQDKESVGNLVKLIDKSNGYIFAAIEASAVEFSKVAVGPVDWDYYRYP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0777 400 CDD GPN2 105 368 - -
Lele02g0777 400 FunFam GPN-loop GTPase 2 106 381 - -
Lele02g0777 400 Pfam Conserved hypothetical ATP binding protein 109 371 IPR004130 -
Lele02g0777 400 Gene3D - 106 381 IPR027417 -
Lele02g0777 400 PANTHER XPA-BINDING PROTEIN 1-RELATED 103 379 IPR004130 -
Lele02g0777 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 371 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0777 Lele-ChrLele02 4755204 4759717 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0777 02 4755204 4759717 Lele02g0777 02 4755204 4759717 ECH
Lele02g0777 02 4755204 4759717 Lele03g0798 03 4667081 4670176 hybridization
Lele02g0777 02 4755204 4759717 Lele04g0798 04 4891785 4894143 hybridization