Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0798 ATGGTGTTTGGGCAAGTAGTTATTGGTCCTCCTGGCTCCGGCAAAACAACCTACTGCAATGGCATGTCTCAGTTCCTGAAACTTATTGGAAGGAAGGTTGCTGTAATTAATCTGGATCCTGCCAATGATTCACTGCCCTACGAATGCGCAGTGAATATCGAGGATGTTGTGAAATTAAGTGATGTAATGGCGGAGCATTCTCTAGGCCCTAATGGGGGCCTTGTGTATTGTATGGACTATCTAGAGAAAAATATTGACTGGTTACAAGCTAAGTTGGAACCCCTTCTGAAAGATAACTATCTACTGTTTGATTTTCCTGGCCAAGTTGAACTATTTTTTCTTCATTCAAATGCCAAGGAGGTCATCATGAAACTCATTAAAAAATTGAACCTAAGGTTGACTGCAGTGCATTTGGTTGATGCTCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGATTCTATCCTTATCAACAATGCTACATCTAGAACTCCCTCACATTAATGTCTTGTCAAAAATTGATTTGATTGAGAGCTATGGAAGGCTAGCATTTAACCTTGATTTCTACACAGATGTGCAAGACTTGTCATATTTACAACGCCATCTTGGTCAGGATCCTCGTGCTGCTAAGTACAGAAAACTAACGAAGGAATTATGTCAAGTTATAGAAGACTTCGGTCTTGTAAACTTTACAACCTTAGATATTCAGGACAAAGAAAGTGTTGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGCTGCCATAGAAGCAAGTGCAGTTGAATTCAGCAAGATTGCTGTTGGCCCTGTTGATTGGGATTATTATAGATATCCTTAG 855 0.3965 MVFGQVVIGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDSLPYECAVNIEDVVKLSDVMAEHSLGPNGGLVYCMDYLEKNIDWLQAKLEPLLKDNYLLFDFPGQVELFFLHSNAKEVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIESYGRLAFNLDFYTDVQDLSYLQRHLGQDPRAAKYRKLTKELCQVIEDFGLVNFTTLDIQDKESVGNLVKLIDKSNGYIFAAIEASAVEFSKIAVGPVDWDYYRYP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0798 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 255 IPR027417 -
Lele04g0798 284 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Lele04g0798 284 CDD GPN2 3 252 - -
Lele04g0798 284 Gene3D - 4 265 IPR027417 -
Lele04g0798 284 FunFam GPN-loop GTPase 2 4 265 - -
Lele04g0798 284 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 263 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0798 Lele-ChrLele04 4891785 4894143 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0798 04 4891785 4894143 Lele04g0798 04 4891785 4894143 ECH
Lele01g0805 01 4666643 4670056 Lele04g0798 04 4891785 4894143 hybridization
Lele02g0777 02 4755204 4759717 Lele04g0798 04 4891785 4894143 hybridization