Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0798 ATGGTGTTTGGGCAAGTAGTAATTGGTCCTCCTGGCTCCGGCAAAACAACCTACTGCAATGGCATGTCTCAGTTCCTGAAACTTATTGGGAGGAAGGTTGCTGTAATTAATCTGGATCCTGCCAATGATTCACTGCCCTACGAATGCGCTGTGAACATCGAGGATGTTGTGAAATCAAGTGATGTAATGGCGGAACATTCTCTAGGTCCTAATGGGGGCCTTGTGTACTGTATGGACTATCTAGAGAAAAATATTGACTGGTTACAAGCTAAGTTGGAACCCCTTCTGAAAGGTTCGTGCAATATGCCTCCATTACTAGATTTATTTGCTTTACTGACAGACAATCTATTGACTGCAGTGCATTTGGTTGATGCTCATCTTTGCTGTGACCCTGGGAAGTCTCAGGACAAAGAAAGTGTTGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGCTGACATAGAAGCAAGTGCAGTTGAATTCAGCAAGATTGCTGTTGGCCCTGTTGATTGGGATTATTATAGATATCCTTGGATTCAATCCACAGTTGCAGCAGTGCAAGAGAAGTACATGAAGGATGATGAAAACATTGATGACGATGATTGA 618 0.4239 MVFGQVVIGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDSLPYECAVNIEDVVKSSDVMAEHSLGPNGGLVYCMDYLEKNIDWLQAKLEPLLKGSCNMPPLLDLFALLTDNLLTAVHLVDAHLCCDPGKSQDKESVGNLVKLIDKSNGYIFADIEASAVEFSKIAVGPVDWDYYRYPWIQSTVAAVQEKYMKDDENIDDDD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0798 205 Gene3D - 1 140 IPR027417 -
Lele03g0798 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 157 IPR027417 -
Lele03g0798 205 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 95 IPR004130 -
Lele03g0798 205 Pfam Conserved hypothetical ATP binding protein 7 93 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0798 Lele-ChrLele03 4667081 4670176 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0798 03 4667081 4670176 Lele03g0798 03 4667081 4670176 ECH
Lele01g0805 01 4666643 4670056 Lele03g0798 03 4667081 4670176 hybridization
Lele02g0777 02 4755204 4759717 Lele03g0798 03 4667081 4670176 hybridization