Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0582 ATGCCGCTCGGAGAAAGGGCTGGAGATAACACCGAATCACGGTATTGCGGTGTAGAGACGGAGTTCGATGTTGACATGCCATACTTGCTGTCTCACCATCTCGTTTCTGGGGGATTCGATTTCGTTGTTGCTCCTCTGATGGATCCTGCATATAGGCCGAGCTTAGTGCAGAAGGATAGTTTTGGTTCTGCTGTTCTTCCATTTGCTGGATCAGACTTAGTCGTGAGCCCATCACAGTGGAGTACTCGTGTAGTGGGAAAAATTAGCTCATGGATAGATTTGGATTCAGAGGACGAAACCCTCAGGATGGACTCTGAAACCACTCTCAGACAAGAAATAGCTTGGGCTTCTCATCTCTCTCTACAGGCTTGCCTTCTACCAGCTCCCAAGAGAACATCTTGTGCTAATTATGCTAGATGTGTGAATCAAATCTTGCAGAACCTAAATCATTTGCAGCTGTTTCTTAGGATTCCATTGGTCATGTCTGATGATGAGTCCATGGGTGCCAATTCTGAAACTTCAATCGATTCTTGGGAAACTTGGAATTCATTTCGTCTTCTCTGTGAGCATCATAGTCAATTGTCCATGGCACTTGATATTGTGAGTACCTTACCACCAGCGAACTCACTTGGACGCTGGCTTGGGGAGCCTGTTAGATCAGCTATAATAAGTACTGATGTAAGGACACCTTGTGACCTTAGTAGCAGATACTTACTGACCAAATCACATTCAAGCCTTCCATTCTCCCTTCAAAAGGTACTGAATTTTCTTGAAACGTCTGTCCAGATAATCATATGCGGAAAATCAGTTCATCCAAGAGCAAGTGTGGATCCAGATGCTTCTCATGCTGCTGTGGCTTTGAGTGTTCTTTTCCCAGAAAGACATTCTTTGAGGCCCTATCTGGACTATGTTGCTTATCTATACCAAAGAATGGACCCAATTCCTGAGCAAGAACGCTTTGAGCCTCTCATGGATAATCTAGAGGCTCAAACCTATGAAACATTTGAGAAAGACATAGTGAAATACAGTCAGGTATGGGTTCCTGATGAAAAGGTGTCTGAAATTACCACTGTATTGATGGTTGTTGGTGCTGGGCGTGGGCCTCTTGTTCGGGCATCACTAGAGGCAGCTGAAGAGACTGGGAGGAGGCTAAAAGTATATGCAGTGGAAAAGAATCCAAATGCAGTTAGTTTGATTAGGTTAGAGGGCTGGGAAGATTCAGTTACCATAGTCTCAAGTGACATGCGCCACTGGAATGCCCCTGAAAAGGCCGACATATTGGTAAGTGAATTGCTGGGTTCTTTTGGTGACAATGAGCTGTCTCCTGAGTGCCTTGACGGAGCCCAGAGGTACACAAGTTTCATCCAACCAGTGACAGCTTCAAAATTATATAATGATGTTAAGGCACATAAAGATATAGCACACTTTGAAACTGCTTATGTCGTGAAATTACACAATGTGGCTAGGCTGGCACCATCTCAGCCTGTTTTTACATTTACTCATCCAAAACCCTTAGATATGGAAAGCAACCATCGATATAAAAAGTTGCAATTTGTGATACCTAATGACACTGGATCAGCCATGGTTCATGGGTTTGCTGGCTACTTTGATGCTACACTTTACAAAGATGTGCATCTTGGAATTGAACCCTCAACTGCAACGCCAAATATGTTCAGCTGGTTTGCAATATTTTTCCCATTAAGGGTACCCATTTGTGTGGAGCGGGGCGATACTTTAGAAGTACATTTCTGGCGCTGTTGTGGTTCAGCAAAGGTTTGGTATGAGTGGTGCGTTACATCTCCATCTCCGTCTCCAATTCACAATAGCAATGGACGCTCTTACTGGAGGTTTTACTCGAGCAACCGATATGTACAACGGAATAGGGTTACAGACCCTCAGGGGAGCAACAAGTTCTTTGTCAAGCCCAAGATTAGCAAAGTTGCTGAAAACACCCGTGGATATGAGGCTGATCAGGGTACTGCAGGTGTTACTAGGAAGCCTAATAAAGAGATCCTTGAGCATGACAGCAAACGTCAGATTCAGCTCAAGCTGGTGATCCTCGAAGATAAACTCATTGATCAGGGTTACACTGATGCCGAGATTGCTGAGGCTCGGAAGAAATTGGAAGCGGAGGCAGCTAGCAAGGATAGCGATGGACCTATACCGGTATCAATCGCAGAGAAAAAGTAA 2190 0.4452 MPLGERAGDNTESRYCGVETEFDVDMPYLLSHHLVSGGFDFVVAPLMDPAYRPSLVQKDSFGSAVLPFAGSDLVVSPSQWSTRVVGKISSWIDLDSEDETLRMDSETTLRQEIAWASHLSLQACLLPAPKRTSCANYARCVNQILQNLNHLQLFLRIPLVMSDDESMGANSETSIDSWETWNSFRLLCEHHSQLSMALDIVSTLPPANSLGRWLGEPVRSAIISTDVRTPCDLSSRYLLTKSHSSLPFSLQKVLNFLETSVQIIICGKSVHPRASVDPDASHAAVALSVLFPERHSLRPYLDYVAYLYQRMDPIPEQERFEPLMDNLEAQTYETFEKDIVKYSQVWVPDEKVSEITTVLMVVGAGRGPLVRASLEAAEETGRRLKVYAVEKNPNAVSLIRLEGWEDSVTIVSSDMRHWNAPEKADILVSELLGSFGDNELSPECLDGAQRYTSFIQPVTASKLYNDVKAHKDIAHFETAYVVKLHNVARLAPSQPVFTFTHPKPLDMESNHRYKKLQFVIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRVPICVERGDTLEVHFWRCCGSAKVWYEWCVTSPSPSPIHNSNGRSYWRFYSSNRYVQRNRVTDPQGSNKFFVKPKISKVAENTRGYEADQGTAGVTRKPNKEILEHDSKRQIQLKLVILEDKLIDQGYTDAEIAEARKKLEAEAASKDSDGPIPVSIAEKK 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0582 729 Pfam PRMT5 TIM barrel domain 38 309 IPR035247 -
Lele02g0582 729 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 316 596 IPR025799 GO:0016274|GO:0018216
Lele02g0582 729 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 360 615 IPR029063 -
Lele02g0582 729 Gene3D Vaccinia Virus protein VP39 319 452 IPR029063 -
Lele02g0582 729 Gene3D - 4 318 - -
Lele02g0582 729 MobiDBLite consensus disorder prediction 710 729 - -
Lele02g0582 729 Pfam cwf21 domain 672 703 IPR013170 -
Lele02g0582 729 Pfam PRMT5 oligomerisation domain 451 615 IPR035248 -
Lele02g0582 729 PIRSF PRMT5 3 618 IPR007857 GO:0006479|GO:0008168|GO:0035246
Lele02g0582 729 FunFam Protein arginine N-methyltransferase 5 450 617 - -
Lele02g0582 729 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 7 615 IPR025799 GO:0016274|GO:0018216
Lele02g0582 729 Pfam PRMT5 arginine-N-methyltransferase 318 452 IPR035075 -
Lele02g0582 729 Gene3D - 453 616 - -
Lele02g0582 729 SMART cwf21_2 672 713 IPR013170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0582 Lele-ChrLele02 3479632 3490421 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0582 02 3479632 3490421 Lele02g0582 02 3479632 3490421 ECH
Lele02g0582 02 3479632 3490421 Lele03g0593 03 3494618 3502274 hybridization
Lele02g0582 02 3479632 3490421 Lele04g0600 04 3626093 3634127 hybridization