Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0519 ATGGTGAATCCTATGGTAGAACGAGCAACGAGCGACATGCTCATTGGTCCTGATTGGGCGATGAATATCGAGATCTGTGACATGCTGAATAACGACCCCGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAGAATTCAAAAGTTCAACTTCTAGCACTAACTCTACTGGAGACAATCATAAAGAATTGTGGGGACATTGTTCATATGCACGTTGCTGAAAGAGATGTGCTTCATGAGATGGTAAAAATAGCAAAGAAGAAGCCTGATTTTCACGTCAGAGAGAAGATCCTGATTCTCATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCTAGATACCCGCAGTATTATGCTGCATACCAGGAACTGCTGCGTGCTGGGGCAGTATTCCCTAAGAGATCTGAACAATCTGCACCTGTGTTTACACCTCCACAAACACAACCACTATCATCATATCCTCAAAATTTACGCAACTCTGAGGCCTGTCAGGATGCAGCCGAGTCCTCTGCAGAGCCTGAGTTTCCAACTCTGAGTTTGAGCGAAATTCAGAATGCTCGTGGTATTATGGATGTTCTTGCAGAAATGCTTAGTGCCATAGAACCAAGTAACAAAGAAGGTCTTAGGCAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTCGAGCCTACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCGGATGAAGCACTGCTATGCCAAGGTCTAGCTCTCAATGATGACCTGCAGCGAGTACTAGCAAAGCATGAAGCCATTGCTTCAGGTGTTCCTGTTGCAAATCAAACAGAGAAAGTGAAGTCTGAGCCTACTGGAGCACTTGTAGATGTTGGTCCTTTGGTTGATAATGGAGATGCTAGCAAACAAACTGATGGGAGTTCCAGTGCTGAAGGTGGGTCCCAAACGTTGAATCAATTATTGCTTCCTGCTCCTCCCACTTCTAATGGCTCAGCTCTTCATGCTAAGGCTGATCCCAAAATGGACTTGCTCAGTGGTGATGATTATACCTCACCAAAAGCAGATACTTCACTTGCTCTTGTTTCTGCGGGAGAACAGCAGCCAGCAAATCCCGTGTCTGAGCAGAATGCCCTTGTTATTTTTGATATGTTTTCAAATGGAAACAGTGAACTGACTTCCACACAGCCAACCCAGCCAACTAATGTTGGTGGACAAACCAGTCCATTAGCCCCCCATGGTCAACAACAGCAGACAGTCGTACCTACACAAAGTGCATTTTATGCCAATGAAAGCAGGCCTAATGTGGGGTCACCTCATTTTGAGCAACCACATTACTCACAAAGCACAGGTCCTGCCTGGAATGGTCAGGTTGCCCAGCAGCAGCAGCAACCATCAGCTTCACCAGTTTATGGTGCGCAAAGCAGTGAATCATTGCCACCACCCCCGTGGGAAGCTCAACCAACAGATAACGGTAGTCCAGTAGCAGGCAGCAATTATCCCCCATCACTGCAAGTCAGTCAAATGGTTATGACGCATGTTCAGAGTGGTGCACATACTCAGGGAATTCCGGCATTGGGGAATGACCAAATTGGCATGTATATGCAGCCCAATGCTAACAGCCCTTTGTCGCCCATGAATAGCCATGCTTTTCACAGCAATCCAATGGGCTTGCACCCCCAGCATATTCAGGGTGGCGCAGGACCCTATATGGGTATGGTTTCCCCTCAAATGCAAGCTGCTCCTGTGGCTTCTATGTATCCTCAACAGATGTATGGCAACCAATTCTCAGGATATGGCTACGGTCAGCAACAAGGGGTCCCATACCTCGAGCAGCAAATGTATGGCCTATCTGTTAGAGATGATAATGGTTTGAGAAGCCCCTACCAGGTTTCTTCCTCGTCTTATGTGCCACCTGGCAGACCTTCCAAACCAGAGGACAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTCAAATCAAAACCCACTCCAGGTCGAGCTGGTAGCATGTAA 2010 0.4682 MVNPMVERATSDMLIGPDWAMNIEICDMLNNDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIAKKKPDFHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPKRSEQSAPVFTPPQTQPLSSYPQNLRNSEACQDAAESSAEPEFPTLSLSEIQNARGIMDVLAEMLSAIEPSNKEGLRQEVIVDLVEQCRAYKQRVVHLVNSTSDEALLCQGLALNDDLQRVLAKHEAIASGVPVANQTEKVKSEPTGALVDVGPLVDNGDASKQTDGSSSAEGGSQTLNQLLLPAPPTSNGSALHAKADPKMDLLSGDDYTSPKADTSLALVSAGEQQPANPVSEQNALVIFDMFSNGNSELTSTQPTQPTNVGGQTSPLAPHGQQQQTVVPTQSAFYANESRPNVGSPHFEQPHYSQSTGPAWNGQVAQQQQQPSASPVYGAQSSESLPPPPWEAQPTDNGSPVAGSNYPPSLQVSQMVMTHVQSGAHTQGIPALGNDQIGMYMQPNANSPLSPMNSHAFHSNPMGLHPQHIQGGAGPYMGMVSPQMQAAPVASMYPQQMYGNQFSGYGYGQQQGVPYLEQQMYGLSVRDDNGLRSPYQVSSSSYVPPGRPSKPEDKLFGDLVDMAKVKSKPTPGRAGSM 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0519 669 MobiDBLite consensus disorder prediction 439 473 - -
Lele02g0519 669 MobiDBLite consensus disorder prediction 388 430 - -
Lele02g0519 669 Gene3D - 2 135 IPR008942 -
Lele02g0519 669 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lele02g0519 669 CDD VHS 2 132 - -
Lele02g0519 669 CDD GAT_GGA_like_plant 188 266 - -
Lele02g0519 669 MobiDBLite consensus disorder prediction 287 333 - -
Lele02g0519 669 Pfam VHS domain 5 129 IPR002014 GO:0035091|GO:0043130
Lele02g0519 669 Gene3D - 183 272 IPR038425 -
Lele02g0519 669 SUPERFAMILY GAT-like domain 139 269 - -
Lele02g0519 669 MobiDBLite consensus disorder prediction 299 325 - -
Lele02g0519 669 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Lele02g0519 669 MobiDBLite consensus disorder prediction 624 669 - -
Lele02g0519 669 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Lele02g0519 669 FunFam TOM1-like protein 2 182 272 - -
Lele02g0519 669 PANTHER TOM1-LIKE PROTEIN 1 660 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lele02g0519 669 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Lele02g0519 669 FunFam TOM1-like protein 2 1 148 - -
Lele02g0519 669 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Lele02g0519 669 MobiDBLite consensus disorder prediction 388 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0519 Lele-ChrLele02 3141060 3146555 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0519 02 3141060 3146555 Lele02g0519 02 3141060 3146555 ECH
Lele02g0519 02 3141060 3146555 Lele03g0537 03 3191295 3195879 hybridization
Lele02g0519 02 3141060 3146555 Lele04g0540 04 3263357 3276383 hybridization