Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele02g0500 | ATGGAGGACGCTGCGAATTTTCCATACTCCGGCAATTTATCTCGTAAAGTAGTCGCCGTAGCTGCCGGCGAAGCGCATACTCTAGCTCTAACCGGGGATGGGTGTGTATACTCTTGGGGAAGAGGAATATTGGGGCGACTTGGGCGAGGCTCGGAAGAGGACGAGTTTTTTCCTGTTCAGGTCAAGTTTGAGAACCCCGATTCCTCAGGAGACAATATCAAAATTCTGGGAATTGCTGCCGGTGCCTATCATAGTCTTGCTCTTGCAGTGGATATATACAATAAATCACAACTTTCTACTTCTATTGTTCTGTATGCTTGTTGGTTTGTATCATTCAACTATATCCTTGACTATTGTACGGATGGTCAACTTGGTGTTAACGAAGAGGACTCCCATGACTATAGTGGAGACAAGTCTCTAATCCCCTGCCTGTTGAACAAGTTTCTTGAGTTGCACCCTCCTGACTCTTCAACAGACACTCCTGAAGAAGAAAGTAAGGCTTCACTCAAGATACGTTCTGTCAAAGCAGGAGGAATGATGTCTTGGGCTATTGATAACCTAGGGGCCCTATGGATGTGGGGAAACTGCCCACAGAAAAGCAAAGAAGGAGGGTTCTCTCTTGTGAGCAGTTTCATTCCCACACCAGTATGGGATTTTCACGGCCATACTGTTGTCAAGATTGCATGTGGGAATGAGCATGTTGTGGCACTAGTTACTGCAGGAGAATCATACATAGGCGAAGACCTCGTGTGCTACTCTTGGGGTAATAACAGCCATGGTCAATTAGGCTTGGGGGATAGGGAGAGCAGGCCACAACCAGAAGTTGTAAAAGCATTTGACCAGGAGTCCCCCTGGGCAATTTATGAAGTAGCTTGTGGTGCCTTTCACACTGCTTTGCTCACTCACAAAAAGAGCCCCAGTGACACATCAGCAAGCATGTGCTGGACGTTTGGCCTCGGGGATAATGGGCAACTTGGGCATGGAACCACGCAAAGCGAATTGCTTCCCATGCTGGTCAAAGAATTGCCACAGCATGTACATCTAATTTCTGTTGACTGTGGCTTGTTTCATACTAGTGTTGTTTCATCAGCTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGTCTGTGCCCTGATGCTACTTTCACTGGAACTGATTCTGGGGACGCTCTCTCTCCCCTCCTTATCTCGTGCGCGCCACATCAGCCTAGGTTTCCAGAGCCGATCCAAGTTGCTTGTGGAGCTGCGCATACCGTTATCGTTGCACAGGAGGGATATAAGATTTGGTCTTGGGGTAGGGGAAGGAGTGGGGTTCTGGGGAATGGTAAGGCAGTGGATTTTTACACTCCCACACTAGTGTTATGGCCTCCGCTGATAGAGGATTTCATGCAAGAAGAACCGGAGAGTACTGGAGAGAAAGATAAGATGACAGAAAAAGAGACCGAAATGGATGATAAATTAGCCTCAGCATTGGATGAACTGAAGCAGCTTCAGACAAGGTTTTCTGTGATGGAGAGATATGCCAGTATACTTCATGGTTCAATATTTGGAAAGCCTTTTGATGAGCGTGATATCCCAGCGTCATTGATTAACTCAGGTGTATTCGACATTGCAAAGGAATGGGAGCGCATGTTAGAGGAAGCAGATCGTAGTAAGCTAATTAGGTTGGAAATGTTCTACAGAAACATGCTTTCTGGTGTGAAAGATAAGCTGATGAAGAGAAGGATCAAGGAGATTATAAAGGAATGCCTCCAGTCTTCAGAATTTGCAAAATAG | 1782 | 0.4652 | MEDAANFPYSGNLSRKVVAVAAGEAHTLALTGDGCVYSWGRGILGRLGRGSEEDEFFPVQVKFENPDSSGDNIKILGIAAGAYHSLALAVDIYNKSQLSTSIVLYACWFVSFNYILDYCTDGQLGVNEEDSHDYSGDKSLIPCLLNKFLELHPPDSSTDTPEEESKASLKIRSVKAGGMMSWAIDNLGALWMWGNCPQKSKEGGFSLVSSFIPTPVWDFHGHTVVKIACGNEHVVALVTAGESYIGEDLVCYSWGNNSHGQLGLGDRESRPQPEVVKAFDQESPWAIYEVACGAFHTALLTHKKSPSDTSASMCWTFGLGDNGQLGHGTTQSELLPMLVKELPQHVHLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDATFTGTDSGDALSPLLISCAPHQPRFPEPIQVACGAAHTVIVAQEGYKIWSWGRGRSGVLGNGKAVDFYTPTLVLWPPLIEDFMQEEPESTGEKDKMTEKETEMDDKLASALDELKQLQTRFSVMERYASILHGSIFGKPFDERDIPASLINSGVFDIAKEWERMLEEADRSKLIRLEMFYRNMLSGVKDKLMKRRIKEIIKECLQSSEFAK | 593 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele02g0500 | 593 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 249 | 303 | IPR000408 | - | |
| Lele02g0500 | 593 | PRINTS | Chromosome condensation regulator RCC1 signature | 35 | 51 | IPR000408 | - | |
| Lele02g0500 | 593 | PRINTS | Chromosome condensation regulator RCC1 signature | 227 | 243 | IPR000408 | - | |
| Lele02g0500 | 593 | PRINTS | Chromosome condensation regulator RCC1 signature | 354 | 372 | IPR000408 | - | |
| Lele02g0500 | 593 | PRINTS | Chromosome condensation regulator RCC1 signature | 423 | 444 | IPR000408 | - | |
| Lele02g0500 | 593 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 252 | 300 | IPR000408 | - | |
| Lele02g0500 | 593 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 365 | 422 | IPR000408 | - | |
| Lele02g0500 | 593 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 33 | 88 | IPR000408 | - | |
| Lele02g0500 | 593 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 315 | 360 | IPR000408 | - | |
| Lele02g0500 | 593 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 365 | 426 | IPR000408 | - | |
| Lele02g0500 | 593 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 188 | 240 | IPR000408 | - | |
| Lele02g0500 | 593 | SUPERFAMILY | RCC1/BLIP-II | 7 | 91 | IPR009091 | - | |
| Lele02g0500 | 593 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 290 | 300 | IPR000408 | - | |
| Lele02g0500 | 593 | SUPERFAMILY | RCC1/BLIP-II | 160 | 459 | IPR009091 | - | |
| Lele02g0500 | 593 | Coils | Coil | 482 | 502 | - | - | |
| Lele02g0500 | 593 | Gene3D | - | 5 | 246 | IPR009091 | - | |
| Lele02g0500 | 593 | Gene3D | - | 247 | 475 | IPR009091 | - | |
| Lele02g0500 | 593 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 34 | 91 | IPR000408 | - | |
| Lele02g0500 | 593 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 312 | 364 | IPR000408 | - | |
| Lele02g0500 | 593 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 16 | 147 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele02g0500 | Lele-ChrLele02 | 3014081 | 3016853 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele02g0500 | 02 | 3014081 | 3016853 | Lele02g0500 | 02 | 3014081 | 3016853 | ECH | |
| Lele02g0500 | 02 | 3014081 | 3016853 | Lele03g0522 | 03 | 3080128 | 3081339 | hybridization | |
| Lele02g0500 | 02 | 3014081 | 3016853 | Lele04g0520 | 04 | 3141434 | 3144227 | hybridization |