LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0431	ATGGACCTCAAGTTCTTCTTCTCCTTCTTCATTCTTTTCTGTGCAATAATTCACATCCTCGCCATTACCGCCATTGCTTCAGACCCCTGTGCCTCTGAACCCAGCCCCTTGGACGTTGCCCTCATTCCCATTTACTCCAAATGCTCCCCCTTCCAACTTCCCAACAATGTCTCGTGGCTTAGCACCCTCATTATCATGGCCTCCACAGACTCACAACGCCTCGGCTACTTATCTTCTCTTGTCTCTAAGAAGCGCTCAACCTCTGCCCCAATTGCCTCCGGCCATGCTCTCAGTATCGGCAACTATGTCGTCCGGGCCAAGCTCGGCACTCCCGGTCAGCTCATGTTCATGGTCTTAGATACTAGCAGCGATGATGCCTGGGTCCCGTGCTCCGGTTGTACCGGTTGCTCCGCCGTTACTTTTTCGCCCAAAGCTTCTACTACTTTCAGGTCATTGGATTGCTCCGTTCCGCAATGCAGTCAGATCCGTGGATTCTCTTGCCCCGTCACAGGATCCGCCCCGTGTTCGTTTAAACATTCGTACGCTGGTTCATCCTTCTCCGCCATGCTGGTCCAAGATTCTCTCGGACTAGGATCTGATATCATCCCCAATTACGCTTTCGGCTGCGTCAATAACGTCAACGGCGGTTCATTTCCCTCGCAAGGACTACTGGGTCTGGGTAGGGGACCCTTGTCGTTATTTTCGCAAGCTGGGTCACTCTACAGAGGAGTTTTCTCCTACTGCCTCCCCAGTTTTAGGTCATATTTCTTCTCTGGCTCGCTGAAGCTCGGACCCAAAGGTCAGCCCAAACGCATCCGTACCACCCCGCTGCTGCGTAATCCCCGCCGGCCGTCTCTGTACTACGTGAACTTAACTGGAGTCAGTGTGGGTCGTGTCCTTGTGAGGTTACCTAATGAGCTTCTGAGCTTCAACCCGTACACCGGAGCTGGAACCATCATAGATTCAGGTACGGTGATTACCAGATTCGTGGAACCAGTGTATAACGCTATCAGGGACGGGTTCAGAAAACAAGTGAGAGGTCCTTTTTCGAGCTTGGGGGCATTTGACACTTGCTTTATGAAGAGCTACGAGACATTGGCGCCCACTTTTACATTACACTTCTCGGGGTTGGATCTGAAATTGCCTTTGGAAAACAGCTTCATACATAGCAGTTCGGGTTCACTAGCCTGCTTGGCAATGGCGGCGTCACCCAATAATGTGAATTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACTGTTAATAATAAGGTTGGCATAGCTCGTGAGCTCTGATTTGTTGAAGGCGGCATTGCTTCCACTGTTGCTGGCTGTATAACTCATCCACTCGATCTCATCAAAGTTCGCATGCAGCTTCAGGGCGAGAAACACTCTGTTCCTGTCAGACCTCAGCCAGTACAGAATCTGCGTCCAGCTTATGCCTTTCACTTACATTCTCCGGCAATGGCTGCTACTCCGGCCACACTTGGTCTTCAACCTCGCGGTGGAATCATATCGGTTAGTGTTCGGGTTGTGCAGTCCGAAGGCGTGGCTGCCCTGTTTTCCGGCGTATCCGCCACAGTGCTCCGCCAAGCACTCTATTCCACTACCCGGATGGGTCTATACGATGTGATCAAGCACAAATGGGCCGATCCAGATACGGGCAAGATGCTCCTTACCCGAAAGGTAGCGGCGGGGCTAATCGCCGGCGGGATAGGTGCAGCCATTGGAAACCCTGCTGATGTGGCCATGGTCCGGATGCAAGCCGATGGTCGGCTTCCGACGGCTCAACGGCGCGGTTATAAAAGCGTGTTCGACGCAATCGCGCGCATGGCGAGTCAGGAAGGAATTGCTAGCCTGTGGCGGGGTTCGTCTCTTACGGTGACCCGGGCGATGATCGTGACAGCTTCTCAATTGGCTTCTTATGATCAATTCAAGGAGATGATTCTGGGAAAGGGGCTGATGAAGGACGGCCTCGGGACCCACGTCACGGCAAGCTTCGCGGCGGGGTTTGCGGCAGCGGTGGCGTCCAACCCAGTGGATGTGATAAAGACGAGGGTGATGAACATGAATGTTGAGGCAGGGGCAACCCCACCGTATAATGGAGCCTTGGATTGTGCATTCAAGACATTGAAGGCTGAAGGACCTATGTCTCTGTATAAGGGATTTGTTCCCACAATATCAAGGCAGGGACCATTTACAGTGGTTCTATTTGTGACCCTCGAACAAGTGAGGAAGTTGCTCAAGGAATTTTGA	2280	0.5219	MDLKFFFSFFILFCAIIHILAITAIASDPCASEPSPLDVALIPIYSKCSPFQLPNNVSWLSTLIIMASTDSQRLGYLSSLVSKKRSTSAPIASGHALSIGNYVVRAKLGTPGQLMFMVLDTSSDDAWVPCSGCTGCSAVTFSPKASTTFRSLDCSVPQCSQIRGFSCPVTGSAPCSFKHSYAGSSFSAMLVQDSLGLGSDIIPNYAFGCVNNVNGGSFPSQGLLGLGRGPLSLFSQAGSLYRGVFSYCLPSFRSYFFSGSLKLGPKGQPKRIRTTPLLRNPRRPSLYYVNLTGVSVGRVLVRLPNELLSFNPYTGAGTIIDSGTVITRFVEPVYNAIRDGFRKQVRGPFSSLGAFDTCFMKSYETLAPTFTLHFSGLDLKLPLENSFIHSSSGSLACLAMAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELXFVEGGIASTVAGCITHPLDLIKVRMQLQGEKHSVPVRPQPVQNLRPAYAFHLHSPAMAATPATLGLQPRGGIISVSVRVVQSEGVAALFSGVSATVLRQALYSTTRMGLYDVIKHKWADPDTGKMLLTRKVAAGLIAGGIGAAIGNPADVAMVRMQADGRLPTAQRRGYKSVFDAIARMASQEGIASLWRGSSLTVTRAMIVTASQLASYDQFKEMILGKGLMKDGLGTHVTASFAAGFAAAVASNPVDVIKTRVMNMNVEAGATPPYNGALDCAFKTLKAEGPMSLYKGFVPTISRQGPFTVVLFVTLEQVRKLLKEF	759

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0431	759	SUPERFAMILY	Acid proteases	96	438	IPR021109	-
	Lele02g0431	759	Pfam	Xylanase inhibitor N-terminal	102	264	IPR032861	-
	Lele02g0431	759	ProSiteProfiles	Peptidase family A1 domain profile.	102	436	IPR033121	-
	Lele02g0431	759	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	665	755	IPR018108	-
	Lele02g0431	759	Pfam	Xylanase inhibitor C-terminal	287	436	IPR032799	-
	Lele02g0431	759	Gene3D	Acid Proteases	78	263	IPR021109	-
	Lele02g0431	759	PANTHER	MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED	440	755	-	-
	Lele02g0431	759	Gene3D	Mitochondrial carrier domain	442	758	IPR023395	-
	Lele02g0431	759	FunFam	Mitochondrial uncoupling protein 5	439	759	-	-
	Lele02g0431	759	Pfam	Mitochondrial carrier protein	567	659	IPR018108	-
	Lele02g0431	759	Pfam	Mitochondrial carrier protein	441	557	IPR018108	-
	Lele02g0431	759	Pfam	Mitochondrial carrier protein	668	757	IPR018108	-
	Lele02g0431	759	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	565	656	IPR018108	-
	Lele02g0431	759	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	439	556	IPR018108	-
	Lele02g0431	759	Gene3D	Acid Proteases	264	441	IPR021109	-
	Lele02g0431	759	SUPERFAMILY	Mitochondrial carrier	440	752	IPR023395	-
	Lele02g0431	759	FunFam	aspartyl protease AED3	81	264	-	-
	Lele02g0431	759	FunFam	Aspartyl protease AED3	265	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0431	Lele-ChrLele02	2502996	2506321	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0431	441	758	Miscellaneous Gene Families	AT5G09470	55.202	6.24e-112	341

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele02g0431	02	2502996	2506321	Lele02g0431	02	2502996	2506321	ECH
	Lele02g0431	02	2502996	2506321	Lele03g0450	03	2559442	2562835	hybridization
	Lele02g0431	02	2502996	2506321	Lele04g0442	04	2604434	2605408	hybridization