Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0450 ATGATCATGGCCTCAACAGACTCACAACGCCTCGGCTACTTATCTTCCCTTGTCGCTAAGAAGCGCTCAACTTCTGCCCCTATTGCCTCCGGCCAGGCACTAAATATCGGTAATTACGTAGTCCGGGCCAAGCTCGGCACTCCACGCCAGCTCATTCAGGTCCGTGGATTCTCTTGCTCCGTCAAAGGATCCGCCCCGTGTTCGTTTAACCATTCCTATGCTGGTTCATCCTTCTCTGACACGCTGGTCCAAGATTCTCTCGGACTAGGATCTGATATCATCCCTAATTACGCTTTCGGCTGCGTCAATAACGTCAAGGGAGGTTCAATTCCCTCCCAAGGACTACTGGGCCTGGGTCGGGGACCCTTGTCGTTATTTTCGCAAGCTGGTTCACTCTACAGAGCAGTTTTCTCCTACTGCCTTCCCAGTTTTAGGTCATATTTCTTCTCCGGCTCGCTGAAGCTCGGACCCAAAGGTCAGCCCAAACGCATCCGTACCACCCCACTGTTGCGTAATCCCCTCCGGCCGTCTCTGTACTACATGAACTTGACCGGAGTCAGTGTGGGCCGGGTCCTTGTGCGGTTACCTATGTATAACGCCATCAGGGATGAGTTCAGAAAACAAGTGAGAGGTCCTTTTTCGAGCTTGGGGGCATTTGACACTTGCTTTATGAAGAGCTACGAGACATTGGCACCCACTATTACATTGCACTTCTCGGGGTTGGATCTGAAATTGCCATTAGAGAACAGCTTCATACATAGCAGTTCTGGTTCACTTGCATGCTTGGCAATGGCGGCGTCACCCAATAATGTGAACTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACAGTCAATAATAAGGTTGGCATAGCTCGTGAGCTCTGTTCAGTCTTTTTGCTGGTGGATCTCACTCTTTGCAGTGCAGATGATTCAAGTCTCGTATATTTCCGCATTGACAGCATAAGCAAATTTATATCCCTCGACATGGGTCTCAAAGGATTTCTTGAAGGCGGCATTGCTTCCACTGTTGCCGGCTGTACAACTCATCCACTCGACCTCATCAAAGTTCGCATGCAACTTCAGGGCGAGAAACACTCTGTTCCTGTGAGACCTCAGCCAATACAGAATCTGCGTCCAGCTTATGCCTTTCACTCACATTCTCCGGCAATGGCTGCTCATCCGGCCAAACTTGGTCTTCAACCTCGCGGTGGACTCATATCAGTTGGTGTTCGGATTGTGCAGTCCGAAGGCGTGGCTACCCTGTTTTCCGGCGTGTCCGCCACAGTGCTCGGCCAAGCACTCTATTCCACTACTCGTATGGGTCTATACGATGTGATCAAGCATAAATGGGCCGATCCAGATATGGGCAAGATGCTCCTGACCCGAAAGGTAGCGGCGGGGCTAATCGCCGGCGGGATAGGTGCAGCCATTGGAAACCCTTCTGATGTGGCCATGGTCCGGATGCAAGCCGATGGTGGGCTTCCCGAGGCTCAACGGCACGGTTATAAAAGCGCGTTCGACGCAATCACGCGCATGTCGAGTCAGGAAGGAATTGCTAGCCTGTGGCGGGGTTCGTCTCTTACGGTGACCAGGGCAATGATCGTGACAGCTTCTCAATTGGCTTCTTATGATCAATTCAAGGAGATGATTCTGGGAAAGGGGATGATGAAGGATGGACTCGGGACACACGTCACGGCAAGCTTCGCGGCGGGGTTTGCGGCAGCGGTGGCATCCAGTCCGGTGGATTTGGTAAAGACGAGGGTGATGAATATGAATGTTGAGGCAGGGGCAACCTCACCGTATAATGGAGCCTTGGATTGTGCATTCAAGACATTGAAGGCGGAAGGACCTACGGCTCTGTATAAGGGATTTGTTCCCACAATATCAAGGCAGGGACCATTTACAGTGGTGCTATTTGTGACCCTCGAACAAGTGAGGAATTTGCTCAAGGAATTTTGA 1986 0.5111 MIMASTDSQRLGYLSSLVAKKRSTSAPIASGQALNIGNYVVRAKLGTPRQLIQVRGFSCSVKGSAPCSFNHSYAGSSFSDTLVQDSLGLGSDIIPNYAFGCVNNVKGGSIPSQGLLGLGRGPLSLFSQAGSLYRAVFSYCLPSFRSYFFSGSLKLGPKGQPKRIRTTPLLRNPLRPSLYYMNLTGVSVGRVLVRLPMYNAIRDEFRKQVRGPFSSLGAFDTCFMKSYETLAPTITLHFSGLDLKLPLENSFIHSSSGSLACLAMAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCSVFLLVDLTLCSADDSSLVYFRIDSISKFISLDMGLKGFLEGGIASTVAGCTTHPLDLIKVRMQLQGEKHSVPVRPQPIQNLRPAYAFHSHSPAMAAHPAKLGLQPRGGLISVGVRIVQSEGVATLFSGVSATVLGQALYSTTRMGLYDVIKHKWADPDMGKMLLTRKVAAGLIAGGIGAAIGNPSDVAMVRMQADGGLPEAQRHGYKSAFDAITRMSSQEGIASLWRGSSLTVTRAMIVTASQLASYDQFKEMILGKGMMKDGLGTHVTASFAAGFAAAVASSPVDLVKTRVMNMNVEAGATSPYNGALDCAFKTLKAEGPTALYKGFVPTISRQGPFTVVLFVTLEQVRNLLKEF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0450 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 341 458 IPR018108 -
Lele03g0450 661 Pfam Xylanase inhibitor C-terminal 196 300 IPR032799 -
Lele03g0450 661 Gene3D Acid Proteases 159 306 IPR021109 -
Lele03g0450 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 567 657 IPR018108 -
Lele03g0450 661 Gene3D Acid Proteases 53 156 IPR021109 -
Lele03g0450 661 Gene3D Mitochondrial carrier domain 341 660 IPR023395 -
Lele03g0450 661 Pfam Mitochondrial carrier protein 469 561 IPR018108 -
Lele03g0450 661 Pfam Mitochondrial carrier protein 342 459 IPR018108 -
Lele03g0450 661 Pfam Mitochondrial carrier protein 570 659 IPR018108 -
Lele03g0450 661 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 341 656 - -
Lele03g0450 661 Pfam Xylanase inhibitor N-terminal 58 156 IPR032861 -
Lele03g0450 661 SUPERFAMILY Acid proteases 34 305 IPR021109 -
Lele03g0450 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 467 558 IPR018108 -
Lele03g0450 661 SUPERFAMILY Mitochondrial carrier 341 654 IPR023395 -
Lele03g0450 661 FunFam Mitochondrial uncoupling protein 5 341 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0450 Lele-ChrLele03 2559442 2562835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0450 338 660 Miscellaneous Gene Families AT5G09470 53.846 5.81e-110 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0450 03 2559442 2562835 Lele03g0450 03 2559442 2562835 ECH
Lele01g0435 01 2552199 2553083 Lele03g0450 03 2559442 2562835 hybridization
Lele02g0431 02 2502996 2506321 Lele03g0450 03 2559442 2562835 hybridization