Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0442 ATGGGTCTCAAAGGATTTGTTGAAGGCGGCATTGCTTCCACTGTTGCCGGCTGTACAACTCATCCACTCGATCTCATCAAAGTTCGCATGCAGCTTCAGGGCGAGAAACGCTCTGTTCCTGTGAGACCTCAGCCAGTACAGAATCTGCGTCCAGCTTATGCCTTTCACTTACATTCTCCGGCAATGGCTGCTACTCCGGCCACACTTGGTCTTCAACCTCGCGGTGGAATCATATCGGTTAGTATTCGGATTGTGCAGTCCGAAGGCGTGGCTGCCCTGTTTTCCGGCGTATCCGCCACAGTGCTCCGCCAAGCACTCTATTCCACTACTCGTATGGGTCTATACGATGTGATCAGGCACAAATGGGCCGATCCAGATACGGGCAAGATGCTCCTTACCCGAAAGGTAGCGGCGGGGCTAATCGCTGGCGGGATAGGTGCAGCCATTGGAAACCCTGCTGATGTGGCCATGGTCCGGATGCAAGCCGATGGTCGGCTTCCGACGGCTCAACGGCGCGGTTATAAAAGCGTGTTCGACGCAATCGCGCGCATGGCGAGTCAGGAAGGAATTGCTAGCCTGTGGCGGGGTTCGTCTCTTACGGTGACCCGTGCGATGATCGTGACAGCTGCTCAATTGGCTTCTTATGATCAATTCAAGGAGATGATTCTGGGAAAGGGGCTGATGAAGGACGGCCTAGGGACCCACGTCACGGCAAGCTTCGCGGCGGGGTTTGTGGCAGCGGTGGCGTCCAACCCGGTGGATGTGATAAAGACGAGGGTGATGAACATGAATGTTGAGGCAGGGGCAACCCCACCGTATAATGGAGCCTTGGATTGTGCATTCAAGACATTGAAGGCTGAAGGACCTATGGCTCTGTATAAGGGATTTGTTCCCACAATATCAAGGCAGGGACCATTTACAGTGGTTCTATTTGTGACCCTAGAACAAGTGAGGAAGTTGCTCAAGGAATTTTGA 975 0.5364 MGLKGFVEGGIASTVAGCTTHPLDLIKVRMQLQGEKRSVPVRPQPVQNLRPAYAFHLHSPAMAATPATLGLQPRGGIISVSIRIVQSEGVAALFSGVSATVLRQALYSTTRMGLYDVIRHKWADPDTGKMLLTRKVAAGLIAGGIGAAIGNPADVAMVRMQADGRLPTAQRRGYKSVFDAIARMASQEGIASLWRGSSLTVTRAMIVTAAQLASYDQFKEMILGKGLMKDGLGTHVTASFAAGFVAAVASNPVDVIKTRVMNMNVEAGATPPYNGALDCAFKTLKAEGPMALYKGFVPTISRQGPFTVVLFVTLEQVRKLLKEF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0442 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 121 IPR018108 -
Lele04g0442 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 221 IPR018108 -
Lele04g0442 324 SUPERFAMILY Mitochondrial carrier 4 317 IPR023395 -
Lele04g0442 324 Gene3D Mitochondrial carrier domain 4 323 IPR023395 -
Lele04g0442 324 FunFam Mitochondrial uncoupling protein 5 4 324 - -
Lele04g0442 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 320 IPR018108 -
Lele04g0442 324 Pfam Mitochondrial carrier protein 5 121 IPR018108 -
Lele04g0442 324 Pfam Mitochondrial carrier protein 233 322 IPR018108 -
Lele04g0442 324 Pfam Mitochondrial carrier protein 132 224 IPR018108 -
Lele04g0442 324 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0442 Lele-ChrLele04 2604434 2605408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0442 1 323 Miscellaneous Gene Families AT5G09470 56.358 5.61e-119 344
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0442 04 2604434 2605408 Lele04g0442 04 2604434 2605408 ECH
Lele01g0435 01 2552199 2553083 Lele04g0442 04 2604434 2605408 hybridization
Lele02g0431 02 2502996 2506321 Lele04g0442 04 2604434 2605408 hybridization