Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0371 ATGTTTTTTATGCTGAGAAATTTGTTATGGGCAACGTCGAAGCATGATGTATACCTTACGCAAAACTACTCTGTGATGCATTGGTCGTCTTTACTTCGGAGGAGTAAAGAAGTACTTAATGTGGTGAAACCCATTGTTCCAACTGTTAAGCGCACTGGTTTTTTCGCTCAACCTATCTCCAGAGTACAAATAAGCACTATGGCTGTTAAGGAAAATCTAATGGTAGCAGGTGGTTTCCAGGGTGAGCTCATTTGCAAGAATCTGAATCAATCTGGAGTTGCTTTCTGTAGTAAAATAGCTACCGATGATAATGCTATAACCAATGCTGTGGATGCTTACAGTAATCCCAGTGGGTCTTTGAGGGTCATGGCAGCAAATAATGACGCCCAAGTTCGGGATTTCGATGCCGATAATTTTGCTTCTCTTGGTTGCTTCAAATATGACTGGTCTGTTAACAGTATTTCCGTTAGTCCCGATGGAAAGTTGTTAGCCGTTCTCGGGGATAGTACTGAGGGTTTGATAGCTGATGCCAACACCGGAAAGGTTACTGGTAGCCTGAAAGGACACTTGGACTATTCTTTTGCGTCCGCGTGGCACCCAGATGGGCGAATATTGGCTACTGGGAATCAGGACACAACATGTAGGTTGTGGGACATTAGAAATCTTTCACGCTCCATTGCTGTACTCAAGGGAAGGATGGGAGCAGTAAGAGCCGTGAGGTTCACTTCAGATGGACGGTTTCTGGCTATGGCTGAGCCAGCAGATTTCGTCCATATTTTTGACTCTCAGAGTGATTACGAACAAGGACAAGAAATCGATTTATTTGGTGAGATCGCTGGCATTTCCTTTAGTCCGGACGCGGAGGCTCTGTTTGTTGGTATCGCTGATCGCACATACGGAAGCTTGTTAGAGTTCAACAGGAAACGTTGTAATCAATATCTAGACTCCATGTTTTAG 957 0.442 MFFMLRNLLWATSKHDVYLTQNYSVMHWSSLLRRSKEVLNVVKPIVPTVKRTGFFAQPISRVQISTMAVKENLMVAGGFQGELICKNLNQSGVAFCSKIATDDNAITNAVDAYSNPSGSLRVMAANNDAQVRDFDADNFASLGCFKYDWSVNSISVSPDGKLLAVLGDSTEGLIADANTGKVTGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLWDIRNLSRSIAVLKGRMGAVRAVRFTSDGRFLAMAEPADFVHIFDSQSDYEQGQEIDLFGEIAGISFSPDAEALFVGIADRTYGSLLEFNRKRCNQYLDSMF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0371 318 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 186 221 - -
Lele02g0371 318 SMART WD40_4 179 218 IPR001680 GO:0005515
Lele02g0371 318 SMART WD40_4 222 261 IPR001680 GO:0005515
Lele02g0371 318 SMART WD40_4 138 176 IPR001680 GO:0005515
Lele02g0371 318 Pfam WD domain, G-beta repeat 181 218 IPR001680 GO:0005515
Lele02g0371 318 ProSitePatterns Trp-Asp (WD) repeats signature. 205 219 IPR019775 -
Lele02g0371 318 SUPERFAMILY WD40 repeat-like 57 298 IPR036322 GO:0005515
Lele02g0371 318 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 2 315 - -
Lele02g0371 318 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 227 IPR001680 GO:0005515
Lele02g0371 318 Gene3D - 63 314 IPR015943 GO:0005515
Lele02g0371 318 FunFam WD-40 repeat family protein 99 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0371 Lele-ChrLele02 2156869 2159119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0371 164 298 Miscellaneous Gene Families AT5G08390 30.667 4.91e-12 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0371 02 2156869 2159119 Lele02g0371 02 2156869 2159119 ECH
Lele02g0371 02 2156869 2159119 Lele03g0381 03 2203850 2208559 hybridization
Lele02g0371 02 2156869 2159119 Lele04g0379 04 2253380 2255651 hybridization