Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0349 ATGACAAGCTTGAAGAAAAAGCCTGCGATTATCACCCCAAAACTACTTAAATGCGGAGGCAGTTCGTATCCAAGAGAATGGGATTATGCAAGGTTTAGGAAGATTGCTGATAAGTGTGGGACTGTTTTGATTTGTGACATGGCTCATATTAGCGGGCTTATGGCCGCTAAGATGGATCCGCTAAACTATTCACATTTATCCAGTGAGAGTCAAATTGCTTATGCTGATCAAGAAGTATGTATTGAAGCTCTCTTATCTGCAACAAGTTCGTCATGTCGTCGTCTAGAAGCTCTTTCCTCTATAGCAATTGCTAGCCCATTTGATTACTGTGATATTGTTACTTCAACAACCCACAAAAGAAAAGATAAACTTCGCATATATCCATCCTTACAAGGAGGCCCGCACAATAATCATATTGCTGCTCTTGCCATAGCCTTAAAACAAGTTGCAACTCCAGAGTACAAAGCATATACGCAACAGGTGAGGAAAAATGCACGGGCCTTAGCATCTGCTTTGCTGAAAAGAAAATGCAGACTGTTAACTGATGGCACCGACAATCACTTCTTGTTCTGGGACCTTACTGCACTCGGCTTACTTGATATTCTTCCAATCTGTCTAACTTTAGCAGCGTCACTTGCTGAGCTTTTTCTCTCAATTTTCTGGTCTACTATAGAAACTATGAGGAGATACCTAGATATTGTTGCAGATCCAATTTCCATATATTTTGAAAAAGGAGGTTGCTTGGAGGATGATTTTGAGATAATAGCTAATTTTCTTCTGAAGGCATCACAGATTACCAGCGATATACAGAAGGAAGACGGAAAATCTTGTAAAGATTTCCTCAAAGGTCTTCAAAATAATAAAGATATCATTGAGCTCAGAAATCAGGTTGAGGCATTGGCTTCCGAGCTTCCAATGCCAGAATTTGATATTTGA 936 0.3974 MTSLKKKPAIITPKLLKCGGSSYPREWDYARFRKIADKCGTVLICDMAHISGLMAAKMDPLNYSHLSSESQIAYADQEVCIEALLSATSSSCRRLEALSSIAIASPFDYCDIVTSTTHKRKDKLRIYPSLQGGPHNNHIAALAIALKQVATPEYKAYTQQVRKNARALASALLKRKCRLLTDGTDNHFLFWDLTALGLLDILPICLTLAASLAELFLSIFWSTIETMRRYLDIVADPISIYFEKGGCLEDDFEIIANFLLKASQITSDIQKEDGKSCKDFLKGLQNNKDIIELRNQVEALASELPMPEFDI 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0349 311 SUPERFAMILY PLP-dependent transferases 103 308 IPR015424 -
Lele02g0349 311 Pfam Serine hydroxymethyltransferase 3 67 IPR039429 -
Lele02g0349 311 Pfam Serine hydroxymethyltransferase 125 197 IPR039429 -
Lele02g0349 311 Gene3D - 96 155 IPR015421 GO:0003824
Lele02g0349 311 SUPERFAMILY PLP-dependent transferases 6 66 IPR015424 -
Lele02g0349 311 Coils Coil 309 311 - -
Lele02g0349 311 Gene3D Aspartate Aminotransferase, domain 1 156 219 IPR015422 GO:0003824
Lele02g0349 311 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 2 64 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Lele02g0349 311 Gene3D - 3 65 IPR015421 GO:0003824
Lele02g0349 311 Gene3D Aspartate Aminotransferase, domain 1 244 307 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0349 Lele-ChrLele02 2004821 2008793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0349 02 2004821 2008793 Lele02g0349 02 2004821 2008793 ECH
Lele02g0349 02 2004821 2008793 Lele03g0360 03 2066740 2070346 hybridization
Lele02g0349 02 2004821 2008793 Lele04g0356 04 2105927 2110497 hybridization