Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0244 ATGATCTCAGCTTTAATATCTTGTTCTCTCTCTGATTATCTGCTCCGAAAGGGTTCTCCCTATGTTGATGGTCAACTTCTAAGACATATATTGGCGGTTGAGCTAAAAAGTGAAATGGTTGGCAAGGAGAACTTGAGGACGGAGGACTTGAACTTATGCTTTGAGCAACTTATGATGGTTGCAGGCGGTGGTAACAGTGGAAACAGTACTAGAGGAGTTAAAATGGAAGCCGGGGTGATCACCGAATGGAAGGATATTCCGGTGGAGCTTTTGATGCAGATTCTGTCCCTCACTGATAATCAGACGGTGATCGCAGCTTCTGGAGTCTGCCGCGGATGGAGAGATGCCATTTGCTTTGCCCTTTCCCGTTTGTCACTATCATGGTGTAGCAAGAACATGAATAACTTGGTCCTGTCGCTTATGCCTAAATTCACAAAACTACAAGTTTTAATCCTTCGTCAAGACAAACCTCAACTAGAGGATAATGCAGTTGCGACTATCTCAAATTTCTGCCAAGACTTGCAGATGCTGGACCTCAGCAAAAGTTTCAGGCTTACTGATCGGTCTCTGTATGCCTTAGCCCATGGATGTCCTAATCTTACAAATCTGAACATCAGTGGTTGCTCGGCATTTAGCGATGTTGCTCTGGCATACCTAGCCAGTTTCTGCAGAAAATTGAAATGTTTAAATCTTTGTGGATGTGTTAGAGCAGTATCAGACACTGCATTACAGGCTATAGGACGTTATTGCAACCAATTACAATCTTTGAACCTTGGATGGTGTGAAAATGTTGGTGATGATGGAGTGACAAGTTTAGCAGCTGGTTGCCCTGATCTTAGAACGCTTGACTTGTGTGGCTGTGTCCAAATAACAGATGAGAGTGTGATTGCTTTGGCAAACGGTTGTCCCCATCTGAGGTCCCTTGGGCTGTACTACTGTCAAAACATCACAGACACAGCAATGTATTCATTGGCTCATAGCAAAGTGAACAACAGGATGTGGAGATCTGTGAAAGGAATTGATGAAGAGGATGGGGGGCTAAGAACTCTCAACATTAGCCAATGTACGGCACTCACACCCTCTGCTGTTCAAGCCGTGTGTGATTCGTTTCCGGCGCTTCACACCTGCTCCGGCAGGCATTCACTCATCATGAGTGGCTGTTTGAATCTGACTTCTGTGCATTGTGCTTGTGCCGTGCATTCACATCGAGCACTCGCCTCTCTTCCATATCAAGCTCATTGA 1242 0.4517 MISALISCSLSDYLLRKGSPYVDGQLLRHILAVELKSEMVGKENLRTEDLNLCFEQLMMVAGGGNSGNSTRGVKMEAGVITEWKDIPVELLMQILSLTDNQTVIAASGVCRGWRDAICFALSRLSLSWCSKNMNNLVLSLMPKFTKLQVLILRQDKPQLEDNAVATISNFCQDLQMLDLSKSFRLTDRSLYALAHGCPNLTNLNISGCSAFSDVALAYLASFCRKLKCLNLCGCVRAVSDTALQAIGRYCNQLQSLNLGWCENVGDDGVTSLAAGCPDLRTLDLCGCVQITDESVIALANGCPHLRSLGLYYCQNITDTAMYSLAHSKVNNRMWRSVKGIDEEDGGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVHCACAVHSHRALASLPYQAH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0244 413 Pfam Leucine Rich repeat 302 325 IPR001611 GO:0005515
Lele02g0244 413 Pfam Leucine Rich repeat 250 273 IPR001611 GO:0005515
Lele02g0244 413 Pfam Leucine Rich repeat 276 299 IPR001611 GO:0005515
Lele02g0244 413 Pfam F-box-like 84 118 IPR001810 GO:0005515
Lele02g0244 413 SUPERFAMILY RNI-like 118 326 - -
Lele02g0244 413 Gene3D Ribonuclease Inhibitor 118 408 IPR032675 -
Lele02g0244 413 Gene3D - 82 117 - -
Lele02g0244 413 PANTHER UNCHARACTERIZED 301 400 - -
Lele02g0244 413 SUPERFAMILY F-box domain 76 118 IPR036047 GO:0005515
Lele02g0244 413 SMART LRR_CC_2 197 222 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 302 327 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 223 249 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 171 196 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 250 275 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 344 369 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 276 301 IPR006553 -
Lele02g0244 413 SMART LRR_CC_2 118 143 IPR006553 -
Lele02g0244 413 FunFam F-box protein SKP2B 118 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0244 Lele-ChrLele02 1390020 1393130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0244 02 1390020 1393130 Lele02g0244 02 1390020 1393130 ECH
Lele02g0244 02 1390020 1393130 Lele03g0259 03 1421014 1423357 hybridization
Lele02g0244 02 1390020 1393130 Lele04g0250 04 1492148 1497601 hybridization