Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1414 ATGGTGGAGCTATCCTTTGTCTCTAAAGCGAAGTCAGCCTTCCATTCAGCGGCTGCGAAAGCTGAGCGAGTTCTTGTTGACTTGAAATCCGAGCGAGGTCCTGACAAAGAATCGCCTGATGGATTGACTAGGAATCCAGAAAATGAATCTCATCAGAACGTGGGAGATTCAAAGCTTCACAGTGAATTGAGGCATATGAAGTGGAGGCCTGCATATAGAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCGAATAAGGAGAAAAGAAGTTGAAGAGATGGACGAACTTAGGGATATAACCATGGACGTTCCATTTTATGAAGAAAATTTGTACACAGTCAATAAGAAATATGATCTTGAGGCCAAGGTTTCAGAAGCAGTTCCCACGGTTGAAAGCTTAACTGCTGCAACTATATATCCAATTTGTCCATCATCTGTAATTAAAGATTCCATTCCCCCATCAACTGTGCTGAAGCAATTGGCTATGGCTGTTGAGGCTGGAAGGAAAACAAAGTCGATGGAAGAATTTATAGCTTTAACAGGAGGTTCTTCACCTGTTCATGACAGGGTGGGCTTAAGGCTCTCTGCAGTGAAGGCATTAGTTTTGCGCGAAAAGGAGGACAAGCTCAACCTTAGTGATGATGAGAAAGTTCTGTACTTGATTAATTCTCTGTTTGATCCAGAGAGGGAATTTTTCAAAAGGAAGATTAACTATGGTTTAGAGGAAACTGACTTATCAGCCTTTCCAAGAGATATTCACGGTGCTCCTCTCGAAAGCCTTGTTGTCAAGCTTGCGGAAGTCATTGGAAACTTCAAGAACCTTCGAGAAATGGCTCTGTTTTGGTGCAGAGTTATTGTTGAACTGAGAAAACTTTGGTCTGAGGAGCAATATTTACCCAGAATCCCCTTGAATGAGATTCCAGATTTGAAATCATGCCTCCTATATCAACAACTACAAGTAATAAATTGTTGTATCTCCCGGAAAAATCACCGCGTTGTTGCCACTGAATCTATGGACTCTATGTTGCTAAAAGCCAGCTCAAATATTGATGAGTTAGTAGATTATAGTGATAGCATCACTTCAAGCCCAGTCCAGTATGCTAGATTAAGTACTGGGGAGTCTGTTGTTCGACTTGGTGCTGATTGCCCTGCTGGAGATCTGATGTTATTGGAAACTGGCGAACCTGTTTATTCTCCTTTTACCCAGACAGGAAGACTTTATAAGCAACAAACACCAAATATTCTTTTCACTATTGATTGCGTTGTCCTTTCTTTCTTCCTTCCCCATCTTAATGTAGCTTCAAATCCAGGCTGTATTATGGAAGACTTTGTGAGATGGTATTCTCCTCCTGATTGGGAAGAAAGGGAGCCAAGTACGGAGTCCCAGGAATCTTTAGATGGTAGTGGTTCATTGTCTAACAGAGGTTCTCTAAGTCTGCGCATGCAAAAAGAAGAGCGTTTTGCTTTTACTGCCAAAGAGCTTGTAGTTTTCTCACTTGTGAAGACCAGTAATTTGTGGCGTGCATTGTGGGAAGCAGCAAAACCAGTGCCAGCTGTTAAGCAGGCACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTAAATGCCCTTGAAGACATCCGACCTTCTGAGCTTTTTGAACAGATGTTTATTTCTTTGCTTGGTTCAGGATTTGCCATTGCTGAACATGTGCTATCAGGAAACAGTGACTTCTCAAAAGTGTTCTCTGACTGCAAGGAGTACATTGCAGTCACCTGCCAAGGCAACAATTGGAATGAGAAAATTGATGACCTTTGCCAGGTATATGAATCCGTGGAGGCAATGTTACTGAATCCCGAGGAAGCACTGAGGATGATGAAGCAGACCAAAGAACCAACTATCATAACCGGTGAACTCAAGGATCAGTTAAAGAGGCTTAGCCTTAAGTTTGGTGGTGGCAAAGATAAATTCTTAAGAAGGCCAATCTCCAAAGACAAGATAAACAATGAAGAGAACCCAATTCGACAATCATTTTCAAACTTCTTTGACAGCAAAACATCTTTGTTTTCAAAGAAACCCAAGCCTGTTGTAGGAACATGCGCTGCCGAGTTTTAA 2106 0.4188 MVELSFVSKAKSAFHSAAAKAERVLVDLKSERGPDKESPDGLTRNPENESHQNVGDSKLHSELRHMKWRPAYRGIKQDWQDRIKNIRIRRKEVEEMDELRDITMDVPFYEENLYTVNKKYDLEAKVSEAVPTVESLTAATIYPICPSSVIKDSIPPSTVLKQLAMAVEAGRKTKSMEEFIALTGGSSPVHDRVGLRLSAVKALVLREKEDKLNLSDDEKVLYLINSLFDPEREFFKRKINYGLEETDLSAFPRDIHGAPLESLVVKLAEVIGNFKNLREMALFWCRVIVELRKLWSEEQYLPRIPLNEIPDLKSCLLYQQLQVINCCISRKNHRVVATESMDSMLLKASSNIDELVDYSDSITSSPVQYARLSTGESVVRLGADCPAGDLMLLETGEPVYSPFTQTGRLYKQQTPNILFTIDCVVLSFFLPHLNVASNPGCIMEDFVRWYSPPDWEEREPSTESQESLDGSGSLSNRGSLSLRMQKEERFAFTAKELVVFSLVKTSNLWRALWEAAKPVPAVKQAPLFDEDLAVEGILNALEDIRPSELFEQMFISLLGSGFAIAEHVLSGNSDFSKVFSDCKEYIAVTCQGNNWNEKIDDLCQVYESVEAMLLNPEEALRMMKQTKEPTIITGELKDQLKRLSLKFGGGKDKFLRRPISKDKINNEENPIRQSFSNFFDSKTSLFSKKPKPVVGTCAAEF 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1414 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 436 695 IPR045700 GO:0005096|GO:0043547
Lele01g1414 701 Coils Coil 76 96 - -
Lele01g1414 701 MobiDBLite consensus disorder prediction 28 60 - -
Lele01g1414 701 MobiDBLite consensus disorder prediction 28 44 - -
Lele01g1414 701 Pfam Rab3 GTPase-activating protein catalytic subunit 430 542 IPR026147 -
Lele01g1414 701 MobiDBLite consensus disorder prediction 454 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1414 Lele-ChrLele01 8684371 8691569 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1414 01 8684371 8691569 Lele01g1414 01 8684371 8691569 ECH
Lele01g1414 01 8684371 8691569 Lele03g1418 03 8588294 8595542 hybridization
Lele01g1414 01 8684371 8691569 Lele04g1687 04 21521501 21527850 hybridization