Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1687 ATGGTGGAGCTCTCCTTTGTCTCTAAAGCGAAGTCAGCCTTCCATTCAGCGGCTGCCAAAGCGGAGCGAGTTCTTGTGGACTTGAAATCCGAGCGAGGTCCTGACAAAGAATCGCCCGATGGATTGGCTAGGAATCCAGAAGATGAATCTCATCAGAACGAGGGTGATTCAAAGCTTCACAGTGAATTGCGGCATATGAAGTGGAGGCCTGCATATAGAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCGAATAAGGAGAAAAGAAGTTGAAGAAATGGATGAACTCAGGGTTATAACCATGGCTGTTCCATTTTATGAAGAAAATTTGTACATCATCAATAAGAAATATGATCTTGAGGCCAAGGTTTCAGAGGCAGTTCCCACAGTAGAAAGCTTAACTGCTGCAACTATAGATCCCAATGGTCCATCATCTGTGATTAAAGATTCCATTCCCTCATCATCCGTGCTGAAGCAATTGGCTATGGCTGTTGAGGCTGGAAGGAAAACAAAGTCGATGGAAGATTTTATAGCTTCAACAGGAGGTTCTTCACCTGTTCATGATAGGGCAGGCTTAAGGCTCTCTGCAGTGAAGGCATTAGTTTTGCGCAAAAAGGAGGACAAGCTTAACCTTCTTGATGATGAGAAAGTTCTGTATTCGATTAATTCTCTGTTTGATCCAGAAGGGGAATTTTTCAAAAGGAAGATTAACTATGGTTCAGAGGAAACTTATTTATCATCCTTTCCAAGAGATATTCATGGTGCTCCTCTTGAAAGCCTTGTTGTCAAGCTTGCTAAAGTCATTGGAAACTTCACGAACCTTCGAGAAATGGCTCTGCTTTGGTGCAGAGTTGTTGTTGAACTGAGAAAACTTTGGTCTGAGGAGCAATATTTACCCAGAATCCCCTTGGATGAGATTCCAGATTTTAAATCGTGCCTCCTATATCAACAACTACAAGTAATAAATTGTTGTATCACCCGGAAAAATCACCGTGTTTTTGCCACTGAATCGATGGACTCTATGTTGCTAAAAGCCAGCTCAAATATTGATGAGTTAGTTGATTATAGTGACTGCATCACTTCAAGTCCAGTCCAGTATGCTAGATTAAGTACTGGGGAGTTTGTTGTTCGACTTGGTGCTGATTGCCCTGCTGGAGATCTGATATTGTTGGAAACTGGCGAGCCTGTTTATTCTCCTGTTACCCAGGAAGGACCCCTGCTCACAGAAGATCTGATTGAAGAAACAGAGGAGTTTGTGCTGCAGACTGGAAGTGATGGTGCTGCATGCTATCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCAGGCTGTATTATGGAAGACTTTGTGAGATGGTACTCTCCTCCTGATTGGAAAGAAAGGGAGCCAAGTACGGAGGCCCAAGAATCTTTAGATGGTAGCGGTTCATTGTCTAACAGAGGTTCTCTGAGTCTGCGGATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAGCAGCTAAACCAGTGCCAGCTGTTAAACAGGCACCTTTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTAAATGCCCTTGAAGACATCCGGCCTTCTGAGCTTTTTGAACAACTGTTTATTTCTTTGCTTGGTTCAGGATTAGCTATCGCTGAACCTGTGCTATCTGGAAACAGTGACTTCTCAAAAGTGTTCTCTGACTGCAAGGAGTACATTGCCGTCACCTGCCAAGGCAACAATTGGAATGAGAAAATTGATGACCTTTGCCAGGTATATGAATCCGTGGAGGCAATGTTACTGAATCCTGAGGAAACACTGAGGATGATGAAGCAGACCAAAGAACCAACCATCATAACCGGTGAACTCAAGGATCGGTTGAAGAGGCTTAGCCTTAAATTTGGTGGCAAAGATAAATTCTTAAGAAGACCAATCTCCAAAGACAAAATAAACAATGAAGAGAACCCAATTCGGCAATCATTTTCAAATTTCATTGACAGCAAAACATCTTTGTTTTCAAAGAAGCCCAAGCCTGTAGTAGGAACATGCGCTGCCGAGAACCCTCCCTGTCTTGAAAGTGATTGGACAGTTCTCTAG 2106 0.4307 MVELSFVSKAKSAFHSAAAKAERVLVDLKSERGPDKESPDGLARNPEDESHQNEGDSKLHSELRHMKWRPAYRGIKQDWQDRIKNIRIRRKEVEEMDELRVITMAVPFYEENLYIINKKYDLEAKVSEAVPTVESLTAATIDPNGPSSVIKDSIPSSSVLKQLAMAVEAGRKTKSMEDFIASTGGSSPVHDRAGLRLSAVKALVLRKKEDKLNLLDDEKVLYSINSLFDPEGEFFKRKINYGSEETYLSSFPRDIHGAPLESLVVKLAKVIGNFTNLREMALLWCRVVVELRKLWSEEQYLPRIPLDEIPDFKSCLLYQQLQVINCCITRKNHRVFATESMDSMLLKASSNIDELVDYSDCITSSPVQYARLSTGEFVVRLGADCPAGDLILLETGEPVYSPVTQEGPLLTEDLIEETEEFVLQTGSDGAACYQLLSDMQAFKAANPGCIMEDFVRWYSPPDWKEREPSTEAQESLDGSGSLSNRGSLSLRMQKEGNLWRELWEAAKPVPAVKQAPLFDEDLAVEGILNALEDIRPSELFEQLFISLLGSGLAIAEPVLSGNSDFSKVFSDCKEYIAVTCQGNNWNEKIDDLCQVYESVEAMLLNPEETLRMMKQTKEPTIITGELKDRLKRLSLKFGGKDKFLRRPISKDKINNEENPIRQSFSNFIDSKTSLFSKKPKPVVGTCAAENPPCLESDWTVL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1687 701 MobiDBLite consensus disorder prediction 462 486 - -
Lele04g1687 701 Coils Coil 76 96 - -
Lele04g1687 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 65 689 IPR045700 GO:0005096|GO:0043547
Lele04g1687 701 MobiDBLite consensus disorder prediction 27 60 - -
Lele04g1687 701 Pfam Rab3 GTPase-activating protein catalytic subunit 379 532 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1687 Lele-ChrLele04 21521501 21527850 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1687 04 21521501 21527850 Lele04g1687 04 21521501 21527850 ECH
Lele01g1414 01 8684371 8691569 Lele04g1687 04 21521501 21527850 hybridization
Lele02g1704 02 20601343 20607632 Lele04g1687 04 21521501 21527850 hybridization