Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1418 ATGCTCTTGATCGAGAGAATATCCGAGTCAGCTTTTCTTCTTCCTGCGCATCACAAGCGTAGGAAAATGGTGGAGCTCTCCTTTGTCTCTAAAGCGAAGTCAGCCTTCCATTCAGCGGCTGCGAAAGCGGAGCGAGTTCTTGTTGACTTAAAATCCGAGCGAGGTCCTGACAATGAATCGCCCGATGGATTGACTAGGAATCATGAATCTCATCAGAACGTGGGATATTCAACGCTTCACAGTGAATTGAGGCATATTAAGTGGAGGCCTGCATATAGAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCGAATAAGGAGAAAAGAAGTTGAAGAGATGGACGAACTAAAGGATATAACCATGGACGTTCCATTTTATGAAGAAAATTTGTACAGAGTCAATAAGAAATATGATCTTGAGGCCAAGGTTTCAGAAGCAGTTCCCACGGTTGAAAGCTTAACTGCTGCAACCATAGATCCAATTTGTCCATCATCTGTAATTAAAGATTCCATTCTCCCATCAACTGTGCTGAAGCAATTGGCTATGGCTGTTGAGGTGGGCTTAAGGCTCTCTGCAGTGAAGGCATTAGTTTTGCGCGAAAAGGAGGACAAGCTTAACCTTAGTGATGATGAGAAAGTTCTGTATTTGATTAATTCTCTGTTTGATCCAGAAGGGGAATTTTTCAAAAGGAAGATTAACCATGGTTTAGAGGAAACTGACTTATCATCCTTTCCGAGAGATATTCATGGTGCTCCTCTTGAAAGCCTTGTTGTCAAGCTTGCGGAAGTCATTGGAAACTTTAAGAACGTTCGAGAAATGGCTCTGTTTTGGCGCAGAGCTATTGTTGAACTGAGAAAACTTTGGTCTGAGGAGCAATATTTACCCAGAATCCCCTTGGATGAGATTCCAGATTTGAAATCATGCCTCCTATATCAACAACTACAAGTAATAAATTGTTGTATATCCCGGAAAAATCACCGCGTTGTTGCCACTGAATCTATGGACTCTATGTTGCTAAAAGCCAGCTCAAATATTGATGAGTTAGTAGATTATAGTGACAGCATCACTTCAAGCCCACTCCAGTATGCTAGATTAAGTACTGGGGAGTCTGTTGTTCGACTTGGTGCTGATTGCCCTGCTGGAGATCTGATATTGTTGGAAACTGGCGAACCTGTTTATTCTCCTTTTACCCAGGAAGGACCCCTGCTCACAGAAGATCTGATTGAAGAAACAGAGGAGTTTGTGCTGCAGACAGGAAGTGTTCAGATTTCAAGGGATCTCGTTTGCAGACTTTATAAGCAACAAACACCAAATATTCTTTTCACTATTGATTGTGTTGTCCTTTCTTTCTTCCTTCCCCATCTTAATGTAGCTTGCTGTATTATGGAAGACTTTGTGAGATGGTATTCTCCTCCTGATTGGGAAGAAAGGGAGCCAAGTACGGAGTCCCAGGAATCTTTAGATGGTAGTGGTTCATTGTCTAACAGAGGTTCTCTAAGTCTGCGGATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAGCAGCAAAACCAGTGCCAGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCACTGTTTATTTCTTTGCTTGGTTCAGGATTTGCCATTGCTGAACACGTGCTATCAGGAAACAGTGACTTCTCAAAAGTGTTCTCTGACTGCAAGGAGTACATTGCAGTCACCTGCCAAGGCAACAATTGGAATGAGAAAATTGATGACCTTTGCCAGGTATATGAATCCGTGGAGGCAATGTTACTGAATCCTGAGGAAGCACTGAGGATGATGAAGCAGACCAAAGAACCAACAATCATAACCGGTGAACTCAAGGATCGGTTTAAGAGGCTTAGCCTTAAGTTTGGTGGTGGCAAAGATAAATTCTTAAGAAGGCTAATCTCCAAAGACAAGATAAACAATGAAGAGAACCCGATTCGACAATCATTTTCAAATTTCTTTGACAGCAAAACATCTTTGTTTTCAAAGAAACCCAAGCCTGTTGTAGGAACATGCGCTGCCGAGAACCCTCCCTGTCTTGAAAGTGACTGGACAGTTCTCTAG 2094 0.4222 MLLIERISESAFLLPAHHKRRKMVELSFVSKAKSAFHSAAAKAERVLVDLKSERGPDNESPDGLTRNHESHQNVGYSTLHSELRHIKWRPAYRGIKQDWQDRIKNIRIRRKEVEEMDELKDITMDVPFYEENLYRVNKKYDLEAKVSEAVPTVESLTAATIDPICPSSVIKDSILPSTVLKQLAMAVEVGLRLSAVKALVLREKEDKLNLSDDEKVLYLINSLFDPEGEFFKRKINHGLEETDLSSFPRDIHGAPLESLVVKLAEVIGNFKNVREMALFWRRAIVELRKLWSEEQYLPRIPLDEIPDLKSCLLYQQLQVINCCISRKNHRVVATESMDSMLLKASSNIDELVDYSDSITSSPLQYARLSTGESVVRLGADCPAGDLILLETGEPVYSPFTQEGPLLTEDLIEETEEFVLQTGSVQISRDLVCRLYKQQTPNILFTIDCVVLSFFLPHLNVACCIMEDFVRWYSPPDWEEREPSTESQESLDGSGSLSNRGSLSLRMQKEGNLWRELWEAAKPVPAVKQAPLFDEDLALFISLLGSGFAIAEHVLSGNSDFSKVFSDCKEYIAVTCQGNNWNEKIDDLCQVYESVEAMLLNPEEALRMMKQTKEPTIITGELKDRFKRLSLKFGGGKDKFLRRLISKDKINNEENPIRQSFSNFFDSKTSLFSKKPKPVVGTCAAENPPCLESDWTVL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1418 697 MobiDBLite consensus disorder prediction 476 500 - -
Lele03g1418 697 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 206 685 IPR045700 GO:0005096|GO:0043547
Lele03g1418 697 Coils Coil 96 116 - -
Lele03g1418 697 MobiDBLite consensus disorder prediction 52 66 - -
Lele03g1418 697 MobiDBLite consensus disorder prediction 52 71 - -
Lele03g1418 697 Pfam Rab3 GTPase-activating protein catalytic subunit 374 535 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1418 Lele-ChrLele03 8588294 8595542 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1418 03 8588294 8595542 Lele03g1418 03 8588294 8595542 ECH
Lele01g1414 01 8684371 8691569 Lele03g1418 03 8588294 8595542 hybridization
Lele02g1704 02 20601343 20607632 Lele03g1418 03 8588294 8595542 hybridization