Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1380 ATGATGATGATCAGGTCCCCTTCAATGGCGCCTGCAAAAGAAAACAATAATGTTGCTGTGTCAAGTATGGACTTGGAGAGATTGCTTAGCATGAAAGGGGGCAAAGGAGAAGCTAGCTATGCCAACAATTCTCAAGCTCAGGCCATCCATGCTAAGTCTGTGCTTCATCTTCTCAAAGAAACCCTTGACACAGTTCAGCTTGACGATGATAACCCTAATAATATCCCATTTACAGTTGCGGATTTGGGATGTTCAAGTGGGAGAAACACCATTGATACAGTGGACGTGATCATCAAGCACTTCATCAAGCGGTTCCAGGATTTAGGGTCTATGCCACCTGAGTTTTCTGCTTTCTTCTCTGATCTTCCAAGAAATGACTTCAATACCCTCTTCCAGTTGTTTCCTCCTTTGTTGACCAACTATGGCGGCGGCAGCGAAGAATGCCTTGCTGCCGCCAACAACGAGCGCTCTTACTTTGTCGCCGGAGTTCCTGGCTCATTCTACCGGAGGCTTTTCCCTGCGAGGTCCATCAACTTCTTTCATTCAGCATTTTCACTACATTGGATATCTCAGATACCAGAAAGTGTGGTGGACAAGAGAGCAAGAGAGTATAACAGAGGAAGAGTGTTCATACATGGAGCAAGTGAGGGCACTGCAAATGCATACAAGAATCAGTTTCAAGCAGACTTTGCCACCTTCCTCAAATGTCGTTCCCTTGAGATCAAGAAAGGTGGATCCATGTTCTTGGTTTTCTTGGGTCGGACCTCACCCGACCCTACTGATCAGAGTGGACCCGGCCTCCTCTTTGGGACCCACTTTCAGGACGCCTGGAATGATCTTGTTCAAGAGGGATTAATCAGCAGTGAAAAACGAGACGACTTCAACATTCCTCTGTACGCAGCGAGCCTACAAGAGTTGAAGGAGGTGGTTGAAGCCGACGGCTCCTTTGTGATCAACAAGCTTCAGCTGTTCAAAGGAGGAAGCCCTCTTGTGGTAAGCCGGCCGGATGACGACGCCGATGTCGGCAGAGCCTTAGCCAACAGCTGCCGGACTGTGTCTGGCGTCCTCGTTGAAGCTCAAATCGGTGAGTACCTCAGCAACGAGCTGTTCTCCAGAGTGGCGCGCCGAGCCACCAGCCAAGGCAAACAGCTCTTGCTCCAAATTCAGTTCTTTCATATTGTTGCGTCCCTTTCCGTCGCTTAA 1203 0.4888 MMMIRSPSMAPAKENNNVAVSSMDLERLLSMKGGKGEASYANNSQAQAIHAKSVLHLLKETLDTVQLDDDNPNNIPFTVADLGCSSGRNTIDTVDVIIKHFIKRFQDLGSMPPEFSAFFSDLPRNDFNTLFQLFPPLLTNYGGGSEECLAAANNERSYFVAGVPGSFYRRLFPARSINFFHSAFSLHWISQIPESVVDKRAREYNRGRVFIHGASEGTANAYKNQFQADFATFLKCRSLEIKKGGSMFLVFLGRTSPDPTDQSGPGLLFGTHFQDAWNDLVQEGLISSEKRDDFNIPLYAASLQELKEVVEADGSFVINKLQLFKGGSPLVVSRPDDDADVGRALANSCRTVSGVLVEAQIGEYLSNELFSRVARRATSQGKQLLLQIQFFHIVASLSVA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1380 400 Gene3D - 29 380 IPR042086 -
Lele01g1380 400 Gene3D Vaccinia Virus protein VP39 43 327 IPR029063 -
Lele01g1380 400 Pfam SAM dependent carboxyl methyltransferase 73 397 IPR005299 GO:0008168
Lele01g1380 400 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 398 IPR029063 -
Lele01g1380 400 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 30 379 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1380 Lele-ChrLele01 8490318 8494257 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1380 01 8490318 8494257 Lele01g1380 01 8490318 8494257 ECH
Lele01g1380 01 8490318 8494257 Lele03g1390 03 8396286 8400093 hybridization
Lele01g1380 01 8490318 8494257 Lele04g1646 04 21275053 21275667 hybridization