Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1646 ATGGCGCCTGCAAAAGGTAACAAGAATGTTGCTGTGTCAAGTATGAATTTGGAGAGATTGCTTAGCATGAAAGGTGGTAAAGGAGAAGCTAGCTACGCCAATAATTCTCAAGCTCAGTTATGGTTTTTTTTTTGCGGGCCATACATGCTTGATGATGATGATAACCCTAATAATATCCCATTTACAGTTGCGGATTTGGGATGTTCAAGTGGGAGAAACACCATTGATACAATGGATGTAATCATCAAGCACTTCACCAAGCGGTTTCAGGATTTCGGGTTTGTGCCACCTGAGTTTTCTGCTTCCTTCTCTGATCTTCCGAGCAACGACTTCAATACCATCTTCCAGTTATTTCCTCCTTTGTTGACAAATTATAGTGGCGGCCGCGGAGTTAGTGCGAAGAATGTCTTGCCGCCGCCAATAACCAGCGTTCGTACTTTATCGCCGAAGTCCCTGGCTCATTCTACCGGAGGCTTTTCCCGGCTAGGTCCATCAACTTCTTTCATTCAGCATTTTCACTACATTGAATATCTCAGGTTACTTAATTAA 549 0.4335 MAPAKGNKNVAVSSMNLERLLSMKGGKGEASYANNSQAQLWFFFCGPYMLDDDDNPNNIPFTVADLGCSSGRNTIDTMDVIIKHFTKRFQDFGFVPPEFSASFSDLPSNDFNTIFQLFPPLLTNYSGGRGVSAKNVLPPPITSVRTLSPKSLAHSTGGFSRLGPSTSFIQHFHYIEYLRLLN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1646 182 Pfam SAM dependent carboxyl methyltransferase 59 121 IPR005299 GO:0008168
Lele04g1646 182 Gene3D - 21 34 IPR042086 -
Lele04g1646 182 Gene3D Vaccinia Virus protein VP39 35 122 IPR029063 -
Lele04g1646 182 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 22 126 IPR005299 GO:0008168
Lele04g1646 182 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 125 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1646 Lele-ChrLele04 21275053 21275667 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1646 04 21275053 21275667 Lele04g1646 04 21275053 21275667 ECH
Lele01g1380 01 8490318 8494257 Lele04g1646 04 21275053 21275667 hybridization
Lele02g1660 02 20345555 20347459 Lele04g1646 04 21275053 21275667 hybridization