Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1390 ATGATGATCAGCCTAAGGTCCCCTTCAATGGCGCCTGCAAAAGGAAACAATAATGTTGCGGTGTCAAGTATGGACTTGGAGAGATTGCTTAGCATGAAGGGGGGCAAAGGAGAAGCTAGCTATGCCAACAATTCTCAAGCTCAGGCCATACATGCTAGGTCTGTGCTTCATCTTCTCAAAGAAACCCTTGACACAGTTCAGCTTGATGATGATAACCCTAATAATATCCCATTTACAGTTGCGGATTTGGGATGTTCAAGTGGGAGAAACACCATTGATACAGTGGACGTGATCATCAAGCACTTCATCAAGCGGTTCCAGGATTTAGGGTTTATGCCACCTGAGTTTTCTGCTTTCTTCTCTGATCTTCCAAAAAATGACTTCAATACCCTCTTCCAGTTGTTTCCTCCTTTGTTGACCAACTATGGCGGCGGCGGCGAAGAATGCCTTGCTGCCGCCAACAACCAGCGCTCGTACTTTGTCGCCGGAGTTCCTGGCTCATTCTACCGAAGGCTTTTCCCGGCAAGGTCCATCAACTTCTTTCATTCAGCATTTTCACTACATTGGATATCTCAGATACCAGGAAGTGTGGTGGACAAGAGAGCAAGAGAGTATAACAGAGGAAGAGTGTTCATACATGGAGCAAGTGAGGGCACTGCAAATGCATACAAGAATCAGTTTCAAGCAGACTTTGCCTCCTTCCTCAAATGTCGTTCACTTGAGATCAAGAAAGGTGGATCCATGTTCTTGGTTTTCTTGGGTCGGACCTCACACGACCCGACTGACCAGGGTGGACCCGGCCTCCTCTTTGGGACCCACTTTCAGGACTCCTGGAATGATCTTGTTCAAGAGGGATTAATCAGCAGTGAAAAACGGGACGACTTCAACATTCCTCTGTACGCAGCGAGCCTACAAGAGTTGAAGGAGGTGGTTGAAGCCGACGGCTCCTTTGTGATCAACAAGCTTCAGCTGTTCAAAGGAGGAAGCCCTCTTGTGGTGAGCCGCCCTGATGACGACGCCAATGTCGGCAGAGCCTTAGCCAACAGCTGCCGGACTGTGTCTGGCGTCCTCGTTGAAGCTCAAATCGGTGAGCACCTCAGCAACGAGCTGTTCTCCAGAGTGGCGCGCCGAGCCACCAGCCAAGGCAAACAGCTCTTGCACCAAATTCAGTTCTTTCATATTGTTGCTTCCCTTTCCGTAGCTTAA 1206 0.49 MMISLRSPSMAPAKGNNNVAVSSMDLERLLSMKGGKGEASYANNSQAQAIHARSVLHLLKETLDTVQLDDDNPNNIPFTVADLGCSSGRNTIDTVDVIIKHFIKRFQDLGFMPPEFSAFFSDLPKNDFNTLFQLFPPLLTNYGGGGEECLAAANNQRSYFVAGVPGSFYRRLFPARSINFFHSAFSLHWISQIPGSVVDKRAREYNRGRVFIHGASEGTANAYKNQFQADFASFLKCRSLEIKKGGSMFLVFLGRTSHDPTDQGGPGLLFGTHFQDSWNDLVQEGLISSEKRDDFNIPLYAASLQELKEVVEADGSFVINKLQLFKGGSPLVVSRPDDDANVGRALANSCRTVSGVLVEAQIGEHLSNELFSRVARRATSQGKQLLHQIQFFHIVASLSVA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1390 401 Pfam SAM dependent carboxyl methyltransferase 74 398 IPR005299 GO:0008168
Lele03g1390 401 Gene3D Vaccinia Virus protein VP39 44 328 IPR029063 -
Lele03g1390 401 Gene3D - 30 381 IPR042086 -
Lele03g1390 401 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 31 381 IPR005299 GO:0008168
Lele03g1390 401 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 399 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1390 Lele-ChrLele03 8396286 8400093 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1390 03 8396286 8400093 Lele03g1390 03 8396286 8400093 ECH
Lele01g1380 01 8490318 8494257 Lele03g1390 03 8396286 8400093 hybridization
Lele02g1660 02 20345555 20347459 Lele03g1390 03 8396286 8400093 hybridization