Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1076 ATGGCTGATCATCAACAGAGAATTCACCCAGTCCAAGATGTGGAGGCATCACCACAACACACACCCTCAGCTCCACTGTTCCCGAGGAACAAGTCAAAGTCCGATAACGGTGTACCGGAGGTGGAGGAGAGACCCATGCCGGTGCCGGCGAAGAAAAGGAGATCAAGAAGCTGCTGCTGCAAGTTTCTGTGCTGGACGATAAGCCTTCTGCTGATACTTATAGTAGCCATAGGCATAACTATAGGAATTCTGTTCCTTGTGTTCAGGCCAAAGCTTCCCAAATACTCCATAGACGGACTTAAAGTAGCCCAGTTCAGCATTTCAGAAGACAACAATCTGTCTGCAACTTTCAATGTGACAGTGACAGCGAGAAACCCAAACAAGAAGATTGGAATATACTATGAAGGAGGAAGCCATGTGAGTGCTTGGTACATGGACACAAAGTTATGTGAAGGGTCATTGCCTAAGTTCTATCAGGGTCACAAGAACACTACAGTGATTCATTTGCCACTTTCTGGGCAAATACAGAATGCAACTGGGTTGCAGACTGTGATTCAGCAGCAGATGCAGCAGACTGGGAATATTCCTCTGAATCTTAAGGCAAACCAACCTGTTAGAGTGAAGCTTGGGAAATTGAAACTGTTCAAAGTGAAGTTCAGGGTTAGGTGCACGCTTGTGGTGGATAGATTGGAAAGTAATAATGAGATTAAGATTGTAAGTAGCAGCTGTAAGTTCAGGCTTAGGCTGTGA 750 0.4533 MADHQQRIHPVQDVEASPQHTPSAPLFPRNKSKSDNGVPEVEERPMPVPAKKRRSRSCCCKFLCWTISLLLILIVAIGITIGILFLVFRPKLPKYSIDGLKVAQFSISEDNNLSATFNVTVTARNPNKKIGIYYEGGSHVSAWYMDTKLCEGSLPKFYQGHKNTTVIHLPLSGQIQNATGLQTVIQQQMQQTGNIPLNLKANQPVRVKLGKLKLFKVKFRVRCTLVVDRLESNNEIKIVSSSCKFRLRL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1076 249 MobiDBLite consensus disorder prediction 1 48 - -
Lele01g1076 249 Pfam Late embryogenesis abundant protein 120 224 IPR004864 -
Lele01g1076 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 231 - -
Lele01g1076 249 SUPERFAMILY LEA14-like 71 207 - -
Lele01g1076 249 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1076 Lele-ChrLele01 6299201 6299950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1076 50 249 EF-hand Containing Proteins AT5G21130 28.079 3.19e-29 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1076 01 6299201 6299950 Lele03g1081 03 6291590 6292339 hybridization
Lele01g1076 01 6299201 6299950 Lele04g1090 04 6852175 6852927 hybridization