Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1081 ATGGCTGATCATCAACAGAAAATTCACCCAGTCCAAGATGTGGAGGCATCACCACAACAAACACCCTCAGCTCCACTGTTCCGGAGGGACAAGTCAAAGTCCGATAACGGTGTACCGGTGGTGGAGGAGCGAGCCATGCAGGCGCAGGCGAAGAAAAGGAGATCAAGAAGCTGCTGCTGCAAGTTTCTGTGCTGGACGATAAGCCTTCTGCTGATACTTATAGTAGCCATAGGCATAACTATAGGAATTCTGTTCCTTGTGTTCAGGCCAAAGCTTCCCAAATACTCCATAGACGGACTTAAAGTAGCCCAGTTCAGCATTTCAGAAGACAACAATCTGTCTGCAACTTTCAATGTGACAGTGACAGCGAGAAACCCAAACAAGAAGATTGGAATATACTATGAAGGAGGAAGCCATGTGAGTGCTTGGTACATGGACACAAAGTTATGTGAAGGGTCATTGCCTAAGTTCTATCAGGGTCACAAGAACACTACAGTGATTCATTTGCCACTTTCTGGGCAAATACAGAATGCAACTGGCTTGCAGACTGTGATTCAGCAGCAGATGCAGCAGACTGGGAATATTCCTCTGAATCTTAAGGCAAACCAACCTGTTAGAGTGAAGCTTGGGAAATTGAAACTGTTCAAAGTGAAGTTCAGGGTTAGGTGCACGCTTGTGGTGGATAGATTGGAAAGTAATAATGAGATTAAGATTGTAAGTAGCAGCTGTAAGTTCAGGCTTAGGCTGTGA 750 0.452 MADHQQKIHPVQDVEASPQQTPSAPLFRRDKSKSDNGVPVVEERAMQAQAKKRRSRSCCCKFLCWTISLLLILIVAIGITIGILFLVFRPKLPKYSIDGLKVAQFSISEDNNLSATFNVTVTARNPNKKIGIYYEGGSHVSAWYMDTKLCEGSLPKFYQGHKNTTVIHLPLSGQIQNATGLQTVIQQQMQQTGNIPLNLKANQPVRVKLGKLKLFKVKFRVRCTLVVDRLESNNEIKIVSSSCKFRLRL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1081 249 MobiDBLite consensus disorder prediction 12 27 - -
Lele03g1081 249 Pfam Late embryogenesis abundant protein 120 224 IPR004864 -
Lele03g1081 249 MobiDBLite consensus disorder prediction 1 38 - -
Lele03g1081 249 SUPERFAMILY LEA14-like 71 207 - -
Lele03g1081 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1081 Lele-ChrLele03 6291590 6292339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1081 50 249 EF-hand Containing Proteins AT5G21130 28.079 4.28e-29 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1076 01 6299201 6299950 Lele03g1081 03 6291590 6292339 hybridization
Lele02g1102 02 7011544 7012296 Lele03g1081 03 6291590 6292339 hybridization