Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1090 ATGGCTGATCATCAACAGAGAATTCACCCAGTCCAAGATGTGGAGGCATCCCCTCAACACACACCATCAGCACCACTGTTCCCGAAGGACGTGTCAAAGTCCGATAACGGTGCCATACCGGTGGTGGAGGAGCGAGCCATGCCGGCGCCGGCGAAGAAAAAAAGATCAAGAAGCTGCTGCTGCAAGTTTCTGTGCTGGGCCATAGGCCTTCTGCTGATACTTATAGTAGCCATAGGCATAACTATAGGAATTCTGTTCCTTGTGTTCAGGCCAAAGCTTCCCAAATACTCCATAGACGGACTTAGAGTAGCCCAGTTCAGTATTTCAGAAGATAACAATCTCTCTGCAACTTTCAATGTGACAGTGACAGCGAGAAACCCAAACAAGAAGATTGGAATATACTATGAAGGAGGAAGCCATGTGAGTGCTTGGTACCTGGACACAAAGTTATGTGAAGGGTCTTTGCCAAAGTTCTATCAGGGTCATAAGAACACTACAGTGATTAATTTGCCACTTTCTGGGCAAATACAGAATGCAACTGGGTTGCAGAGTGTGATTCAGCAACAGATGCAGCAGACTGGGAATATTCCTCTGAATCTTAAGGCAAATCAACCTGTGAGGGTGAAGCTTGGGAAATTGAAACTGTTCAAAGTGAAGTTCAGAGTTAGGTGCAGGCTTGTGGTGGATAGATTGGAAAGTAATAATGAGATTAAGATTGTAAGTAGCAGCTGTAAGTTCAGGCTTAGGCTGTGA 753 0.4542 MADHQQRIHPVQDVEASPQHTPSAPLFPKDVSKSDNGAIPVVEERAMPAPAKKKRSRSCCCKFLCWAIGLLLILIVAIGITIGILFLVFRPKLPKYSIDGLRVAQFSISEDNNLSATFNVTVTARNPNKKIGIYYEGGSHVSAWYLDTKLCEGSLPKFYQGHKNTTVINLPLSGQIQNATGLQSVIQQQMQQTGNIPLNLKANQPVRVKLGKLKLFKVKFRVRCRLVVDRLESNNEIKIVSSSCKFRLRL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1090 250 MobiDBLite consensus disorder prediction 1 33 - -
Lele04g1090 250 Pfam Late embryogenesis abundant protein 121 225 IPR004864 -
Lele04g1090 250 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1090 Lele-ChrLele04 6852175 6852927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1090 51 250 EF-hand Containing Proteins AT5G21130 28.571 1.73e-29 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1076 01 6299201 6299950 Lele04g1090 04 6852175 6852927 hybridization
Lele02g1102 02 7011544 7012296 Lele04g1090 04 6852175 6852927 hybridization