Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0955 ATGGCCGAAGAAGGACAAGTCATTGGCTGCCACACCGTTGAGGCCTGGAAGGAGCAGCTTGAGAAGGGCAACGCATCCAAGAAACTGATTGTGGTGGATTTTACTGCTTCATGGTGCGGTCCATGCCGTTTCATTTCCCCAGTTTTGGCAGAGATTGCTAAGAAGATGACGAATGTCATCTTTCTCAAGGTCGATGTTGATGAGTTGAGGACTGTTTCAGAGGAATGGGGCATCGAAGCTATGCCAACCTTCTTGTTCCTGAAAGAAGGCAAATTAGTGGATAAGGTTGTGGGTGCTAAGAAGGAGGAGTTGCAATTGACCATAAATAAGCATGCTGCCTGA 342 0.4737 MAEEGQVIGCHTVEAWKEQLEKGNASKKLIVVDFTASWCGPCRFISPVLAEIAKKMTNVIFLKVDVDELRTVSEEWGIEAMPTFLFLKEGKLVDKVVGAKKEELQLTINKHAA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0955 113 FunFam Thioredoxin 6 113 - -
Lele01g0955 113 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Lele01g0955 113 SUPERFAMILY Thioredoxin-like 6 111 IPR036249 -
Lele01g0955 113 PANTHER THIOREDOXIN 7 110 - -
Lele01g0955 113 CDD TRX_family 18 103 - -
Lele01g0955 113 Pfam Thioredoxin 10 109 IPR013766 -
Lele01g0955 113 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Lele01g0955 113 PRINTS Thioredoxin family signature 77 88 - -
Lele01g0955 113 PRINTS Thioredoxin family signature 30 38 - -
Lele01g0955 113 PRINTS Thioredoxin family signature 38 47 - -
Lele01g0955 113 TIGRFAM thioredoxin: thioredoxin 22 111 IPR005746 GO:0015035
Lele01g0955 113 Gene3D Glutaredoxin 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0955 Lele-ChrLele01 5515398 5517065 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0955 01 5515398 5517065 Lele01g0955 01 5515398 5517065 ECH
Lele01g0955 01 5515398 5517065 Lele03g0953 03 5535444 5541842 hybridization
Lele01g0955 01 5515398 5517065 Lele04g0951 04 5865356 5872551 hybridization