Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0792 ATGAAATCCTTGTTCAATTGGTCGGGGAAAGAACCTCCCCGAGGGACACCTGTGGTGGTGAAGATGGAGAACCCCAATTGGTCCATGGTTGAGCTTGAAGGTCCTTCAAAGGAAGAACTCCTCGTCACCGACCCATCGGGTTATCCAAGAGATAAGGACAGAGGCAGAAATGCGAAGCAACTCACATGGGTTCTTCTCCTCAAAGCCCACAGAGCCGCCGGTTTCCTGACCTCCGTTGGGTCCGCATTGTTGGACCTAGCCTCATCTGTGAAGCGCCGAGTAGCTTCTGGAAGAACAGACGCCGATGCCGACAACGGAAGCGAAATCCGTGGCGGCAGGGAAAAAGAGAACCCCACTGTGAAGAGCAGGTTTTATTCGTTTATAAAATTGTTCCTATGGCTCTCCGTGCTTCTGCTGTGTTTCGAGGTGGCTGCCTACTTTAAAGGCTGGCATTTTCGCGCGCCTCATCTACAAATTGATTATACGTGGGTAGCCGCATTTGGTGTTAGGGATGTTTTCGATTGGCTGTATTCCCGGTGGGTTTTGTTTCGTGTGGCCTATCTTGCTCCTCCCCTGCAAATCCTGGCCAATGTATGTATTGTGCTATTCCTTCTTCAGAGTCTGGATAGATTAATTCTGTGTCTCGGATGTTTCTGGATTCGGTTTAAGAAGATCAAACCTGTTCCGAAAGAAGGCGCGGTAGATTTTGAGTCCGGTGAGAAAGGTTTCTTCCCTATGGTGCTAGTGCAGATCCCCATGTGTAACGAGAGAGAGGTGTATCAACAATCAATTGCTGCTGCTTGTAATTTGGATTGGCCAAAACCCAAGTTCCTCATACAAGTTCTTGATGATTCCGATGACCCGAACACGCAATGTCTGATCAAGGAAGAGGTCCAAAAGTGGCAGCACGAGGGTGCCCACATTTTGTACCGCCATCGGGTGACAAGGGATGGATACAAGGCTGGTAATCTCAAGTCTGCCATGAATTGTAGCTATGTGAAAGACTATGAATTCGTTGCTATTTTTGATGCTGATTTTCAACCTGCCCCGGATTTCCTGAAGAGAACAATTCCTCATTTCAAGGACAATGAGGAATTAGGCCTAGTTCAAGCAAGATGGGCCTTCGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATAAACTTGGCGTTCCATTTTGAGGTGGAACAGCAGGTAAATGGTGTTTTCATCAATTTCTTCGGGTTTAATGGAACTGCGGGAGTGTGGAGAATCAAGGCTTTAGAGGAATCTGGTGGGTGGTTAGAGAGGACCACCGTCGAGGACATGGACATTGCCGTTCGAGCTCATCTCCATGGCTGGAAATTTATTTATCTCAATGACGTTGAGTGCCAATGTGAAGTGCCAGAGTCCTATGAAGCTTACAGGAAACAACAACACAGGTGGCATTCTGGTCCAATGCAACTATTCCGCCTTTGTTTGCCTGACATCATACGGTCTAATATAAGCATATGGAAGAAATTCAACTTGATCTTTCTCTTCTTTCTACTAAGAAAACTGATATTGCCCTTCTATTCATTTACCCTATTCTGCATAATTCTGCCCATGACAATGTTTGTTCCAGAGGCTGTGCTTCCTGAATGGGTTGTATGTTATATCCCTGCAGTCATGTCTTTTCTTAACATCCTTCCAGCCCCAAAATCCTTTCCCTTCATTGTACCCTACCTTCTTTTTGAGAACACCATGTCTGTTACTAAATTCAATGCCATGATCTCTGGCCTACTGCAGCTCGGTAGTGCATATGAGTGGATTGTGACTAAGAAATCTGGTCGTTCCTCTGAGGGTGATCTTGTTGCATTGATTGAGAAATCCCCCATGCATCAGAGAGGGGCATCGGTGCCTGATCTTCAGGAAATGAAGGAGGTAATCCTACGAGAGGAGGAAAAAGTATCTAAGAAGAAGCATAACAGAATATACTTGAAGGAGCTTTCTTTGGCCTTTCTTCTTTTGACGGCGTCAGCAAGGAGTCTCCTGTCTGCTCAGGGAATCCACTTCTACTTCTTGCTGTTCCAAGGAATATCCTTCCTGTTAGTTGGTCTAGACTTGATCGGGGAACAGGTTGACTGA 2112 0.4616 MKSLFNWSGKEPPRGTPVVVKMENPNWSMVELEGPSKEELLVTDPSGYPRDKDRGRNAKQLTWVLLLKAHRAAGFLTSVGSALLDLASSVKRRVASGRTDADADNGSEIRGGREKENPTVKSRFYSFIKLFLWLSVLLLCFEVAAYFKGWHFRAPHLQIDYTWVAAFGVRDVFDWLYSRWVLFRVAYLAPPLQILANVCIVLFLLQSLDRLILCLGCFWIRFKKIKPVPKEGAVDFESGEKGFFPMVLVQIPMCNEREVYQQSIAAACNLDWPKPKFLIQVLDDSDDPNTQCLIKEEVQKWQHEGAHILYRHRVTRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPAPDFLKRTIPHFKDNEELGLVQARWAFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVECQCEVPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSNISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPEWVVCYIPAVMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLLQLGSAYEWIVTKKSGRSSEGDLVALIEKSPMHQRGASVPDLQEMKEVILREEEKVSKKKHNRIYLKELSLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0792 703 Pfam Glycosyl transferase family group 2 339 533 IPR001173 -
Lele01g0792 703 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 526 IPR029044 -
Lele01g0792 703 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Lele01g0792 703 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 464 IPR029044 -
Lele01g0792 703 Coils Coil 631 651 - -
Lele01g0792 703 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0792 Lele-ChrLele01 4589586 4592093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0792 1 703 Miscellaneous Gene Families AT4G07960 76.611 0.0 1050
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0792 01 4589586 4592093 Lele01g0792 01 4589586 4592093 ECH
Lele01g0792 01 4589586 4592093 Lele03g0785 03 4588812 4591902 hybridization
Lele01g0792 01 4589586 4592093 Lele04g0784 04 4789758 4792963 hybridization