Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0784 ATGAAATCCTTGTTCAATTGGTCGTCGGGGAAAGAACCTCCCCAAGGGACCCCTGTGGTGGTGAAGATGGAGAACCCCAATTGGTCCATGGTTGAGCTTGAAGGTCCTTCAGAGGAGGAATTACTCGTCACCGACCCGTCGAGTTATCCAAGAGATAAGGGCAGAGGTAGAAATGCGAAGCAACTCACATGGGTTCTTCTCCTCAAAGCCCACAGAGCCGCCGGTTTCCTGACCTACGTTGGGTCCGCATTGTTGGGCATAGCCTCGGCTGTGAAGCGCCGAGTAGCTTCTGGAAGAACGGATGCCGATGCCGACAACGAAAACGAAATCCGTGGCGGCAGGGAAAAAGAGAACCCCACTGTGAAGAGCAGGTTTTATTCGTTTATAAAATTGTTCCTATGGCTGTCCGTGCTTCTGCTGTGTTTCGAGGTGGCTGCCTACTTTAAGGGCTGGCATTTTCGTGCGCCTCATCTCCAAATTGATTATACGTGGGTAGCCTCATTTGGTGTTAGGGATGTTTTCGATTGGCTGTATTCGCGGTGGGTCTTGTTTCGGGGGGCCTATCTTGCTCCTCCTCTGCAACTCCTGGCCAATGTATGCATTGTGCTATTCCTTATTCAGAGTCTGGATAGATTAATCCTGTGTCTCGGATGTTTCTGGATTCGGTTTAAGAAGATCAAACCTGTTCCGAAAGAAGGCGCGGTAGATCTTGAGTCCGGTGAGCAAGGTTTCTTCCCTATGGTGCTAGTGCAGATCCCCATGTGTAACGAGAGAGAGGTTTATCAACAATCTATTTCTGCTGTTTGTAATTTGGATTGGCCAAAACCCAAGTTGCTAATACAAGTTCTTGATGATTCCGACGACCCGAACACACAATTTCTGATAAAGGAAGAGGTCCAAAAATGGCAGCACGAGGGTGCTAACATTTTGTACCGGCATCGGGTGATAAGAGACGGATACAAAGCTGGTAATCTCAAGTCTGCCATGAATTGTAGCTACGTGAAAGACTATGAATTCGTTGCTATTTTTGATGCTGATTTTCAACCTGCCCCGGATTTCCTGAAGAGAACAGTTCCTCATTTCAAGGACAATGAGGAATTAGGACTAGTTCAAGCAAGATGGTCCTTCGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAAAACATAAACTTGGCATTCCATTTTGAAGTGGAACAGCAGGTAAACGGTGTTTTCATTAATTTCTTTGGGTTCAATGGAACTGCTGGAGTGTGGAGAATCAAGGCTTTAGAGGAATCTGGTGGGTGGTTAGAGAGGACCACGGTCGAGGACATGGACATTGCTGTTAGGGCTCATCTTCATGGCTGGAAATTTATTTATCTCAATGACGTTGAGTGCCAATGTGAAGTGCCAGAGTCTTATGAAGCTTACAGGAAACAACAACACAGGTGGCATTCTGGTCCAATGCAACTATTCCGCCTTTGTTTGCCTGACGTCATACATTCTAATATAAGCATATGGAAGAAATTCAATTTGATCTTTCTCTTCTTTCTACTAAGAAAACTGATATTGCCCTTCTATTCATTTACCCTATTCTGCATAATTCTGCCCATGACAATGTTTGTTCCAGAGGCTGTGCTTCCTGAATGGGTTGTATGTTATATCCCTGCAGTCATGTCATTTCTTAACATCCTTCCAGCCCCAAAATCCTTTCCCTTCATTGTACCCTATCTTCTTTTTGAGAACACCATGTCTGTTACTAAATTCAATGCCATGATCTCTGGCCTACTGCAGCTCGGTAGTGCATATGAGTGGATTGTGACTAAGAAATCTGGTCGTTCCTCTGAGGGTGATCTTGTTGCATTGATTGAGAAATCCCCTAGGCATCAGAGAGGGGCGTCGGTGCCTGATCTTGAGGAAATGAAGGAGGTAATCCTACGAGAGGAGGAAAAAGCATCTAAGAAGAAGCATAACAGAATATACGTGAAGGAGCTTTCTTTGGCCTTTCTTCTTTTAACGGCGTCAGCAAGGAGTCTCCTGTCTGCTCAGGGAATCCACTTCTACTTCTTGCTATTCCAAGGAATTTCCTTCCTGTTAGTTGGTCTGGACTTGATTGGGGAACAGTATTCACCGCTTTGCAGCCCTGAGCAGAAAACTACTAACTACAAACATAGATCTCTTATGGCCTTCATAAACAAAGCTGAAATTGTGGTTCAAATAGTGAAATTGAACGTTTCCTAG 2223 0.4507 MKSLFNWSSGKEPPQGTPVVVKMENPNWSMVELEGPSEEELLVTDPSSYPRDKGRGRNAKQLTWVLLLKAHRAAGFLTYVGSALLGIASAVKRRVASGRTDADADNENEIRGGREKENPTVKSRFYSFIKLFLWLSVLLLCFEVAAYFKGWHFRAPHLQIDYTWVASFGVRDVFDWLYSRWVLFRGAYLAPPLQLLANVCIVLFLIQSLDRLILCLGCFWIRFKKIKPVPKEGAVDLESGEQGFFPMVLVQIPMCNEREVYQQSISAVCNLDWPKPKLLIQVLDDSDDPNTQFLIKEEVQKWQHEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPAPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVECQCEVPESYEAYRKQQHRWHSGPMQLFRLCLPDVIHSNISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPEWVVCYIPAVMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLLQLGSAYEWIVTKKSGRSSEGDLVALIEKSPRHQRGASVPDLEEMKEVILREEEKASKKKHNRIYVKELSLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQYSPLCSPEQKTTNYKHRSLMAFINKAEIVVQIVKLNVS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0784 740 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 180 701 - -
Lele04g0784 740 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 239 465 IPR029044 -
Lele04g0784 740 Coils Coil 632 652 - -
Lele04g0784 740 FunFam probable xyloglucan glycosyltransferase 5 239 464 - -
Lele04g0784 740 Pfam Glycosyl transferase family group 2 340 534 IPR001173 -
Lele04g0784 740 SUPERFAMILY Nucleotide-diphospho-sugar transferases 248 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0784 Lele-ChrLele04 4789758 4792963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0784 7 702 Miscellaneous Gene Families AT4G07960 77.305 0.0 1049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0784 04 4789758 4792963 Lele04g0784 04 4789758 4792963 ECH
Lele01g0792 01 4589586 4592093 Lele04g0784 04 4789758 4792963 hybridization
Lele02g0766 02 4653750 4656288 Lele04g0784 04 4789758 4792963 hybridization