Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0785 ATGAAATCCTTGTTCAATTGGTCGGGGAAAGAACCTCCCCGAGGGACACCTGTGGTGGTGAAGATGGAGAACCCCAATTGGTCCATGGTTGAGCTTGAAGGTCCTTCAAAGGAAGAACTCCTCGTCGCCGACCCATCGGGTTATCCAAGAGATAAGGACAGAGGCAGAAATGCGAAGCAACTCACATGGGTTCTTCTCCTCAAAGCCCACAGAGCCGCCGGTTGCCTGACCTCCGTTGGGTCCGCATTGTTGGACCTAGCCTCAGCTGTGAAGCGCCGAGTAGCTTCTGGAAGAACAGACGCCGATGCCGACAACGAAAGCGAAATCCGTGGCGGCAGGGAAAAAGAGAACCCCACTGTGAAGAGCAGGTTTTATTCGTTTATAAAATTGTTCCTATGGCTCTCCGTGCTTCTGCTGTGTTTCGAGGTGGCTGCCTACTTTAAAGGCTGGCATTTTCGCGCGCCTCATCTCCAAATTGATTATACGTGGGTAGCCTCATTTGGTGTTAGGGATGTTTTCGATTGGCTGTATTCGCGGTGGGTTTTGTTTCGTGTGGCCTATCTTGCTCCTCCTCTGCAAATCCTGGCCAATGTATGTATTGTGCTATTCCTTATTCAGAGTCTGGATAGATTAATTCTGTGTCTCGGATGTTTCTGGATTCGGTTTAAGAAGATCAAACCTGTTCCGAAAGAAGGCGCGGTAGATCTTGAGTCCGGTGAGAAAGGTTTCTTCCCCATGGTGCTAGTGCAGATCCCCATGTGTAACGAGAGAGAGGTGTATCAACAATCAATTGCTGCTGCTTGTAATTTGGATTGGCCAAAACCCAAGTTCCTCATACAAGTTCTTGATGATTCCGATGACCCGAACACGCAATGTCTGATCAAGGAAGAGGTCCAAAAGTGGCAGCACGAGGGTGCCCACATTTTGTACCGCCATCGTGTGACAAGGGATGGATACAAGGCTGGTAATCTCAAGTCTGCCATGAATTGTAGCTATGTGAAAGACTATGAATTCGTTGCTATTTTTGATGCTGATTTTCAACCTGCCCCGGATTTCCTGAAGAGAACAATTCCTCATTTCAAGGACAATGAGGAATTAGGCCTAGTTCAAGCAAGATGGGCCTTCGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATAAACTTGGCGTTCCATTTTGAGGTGGAACAGCAGGTAAATGGTGTTTTCATCAATTTCTTCGGGTTCAATGGAACTGCTGGAGTGTGGAGAATCAAGGCTTTAGAGGAATCTGGTGGGTGGTTAGAGAGGACCACCGTCGAGGACATGGACATTGCTGTTCGAGCTCATCTCCATGGCTGGAAATTTATTTATCTCAATGACGTTGAGTGCCAATGTGAAGTGCCAGAGTCTTATGAAGCTTACAGGAAACAACAACACAGGTGGCATTCTGGTCCAATGCAACTATTCCGCCTTTGTTTGCCTGACATCGTACAGTCTAATATAAGCATATGGAAGAAATTCAACTTGATCTTTCTCTTCTTTCTACTAAGAAAACTGATATTGCCCTTCTATTCATTTACCCTATTCTGCATAATTCTGCCCATGACAATGTTTGTTCCAGAGGCTGTGCTTCCTGAATGGGTTGTATGTTATATCCCTGCAGTCATGTCTTTTCTTAACATCCTTCCAGCCCCAAAATCCTTTCCCTTCATTGTACCCTACCTTCTTTTTGAGAACACCATGTCTGTTACTAAATTCAATGCCATGATCTCTGGCCTACTGCAGCTCGGTAGTGCATATGAGTGGATTGTGACTAAGAAATCTGGTCGTTCCTCTGAGGGTGATCTTGTTGCATTGATTGAGAAATCTCCCATGCACCAGAGAGGGGCATCGGTGCCTGATCTTCAGGAAATGAAGGAGGTAATCCTACGAGAGGAGGAAAAAACATTTAAGAAGAAGCATAACAGAATATACTTGAAGGAGCTTTCTTTGGCCTTTCTTCTTTTGACGGCGTCAGCAAGGAGTCTCCTGTCTGCTCAGGGAATCCACTTCTACTTCTTGCTGTTTCAAGGAATATCCTTCCTGTTAGTTGGTCTAGACTTGATCGGGGAACAGCCTGGAGCAGGATATTACTAA 2124 0.46 MKSLFNWSGKEPPRGTPVVVKMENPNWSMVELEGPSKEELLVADPSGYPRDKDRGRNAKQLTWVLLLKAHRAAGCLTSVGSALLDLASAVKRRVASGRTDADADNESEIRGGREKENPTVKSRFYSFIKLFLWLSVLLLCFEVAAYFKGWHFRAPHLQIDYTWVASFGVRDVFDWLYSRWVLFRVAYLAPPLQILANVCIVLFLIQSLDRLILCLGCFWIRFKKIKPVPKEGAVDLESGEKGFFPMVLVQIPMCNEREVYQQSIAAACNLDWPKPKFLIQVLDDSDDPNTQCLIKEEVQKWQHEGAHILYRHRVTRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPAPDFLKRTIPHFKDNEELGLVQARWAFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVECQCEVPESYEAYRKQQHRWHSGPMQLFRLCLPDIVQSNISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPEWVVCYIPAVMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLLQLGSAYEWIVTKKSGRSSEGDLVALIEKSPMHQRGASVPDLQEMKEVILREEEKTFKKKHNRIYLKELSLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQPGAGYY 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0785 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 464 IPR029044 -
Lele03g0785 707 Pfam Glycosyl transferase family group 2 339 533 IPR001173 -
Lele03g0785 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 541 IPR029044 -
Lele03g0785 707 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Lele03g0785 707 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0785 Lele-ChrLele03 4588812 4591902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0785 14 701 Miscellaneous Gene Families AT4G07960 78.273 0.0 1053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0785 03 4588812 4591902 Lele03g0785 03 4588812 4591902 ECH
Lele01g0792 01 4589586 4592093 Lele03g0785 03 4588812 4591902 hybridization
Lele02g0766 02 4653750 4656288 Lele03g0785 03 4588812 4591902 hybridization