Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0778 ATGAATCCCTTCTCATCTGCACTCATCGTCTTCCTCGTCGCAACCCTCTCCTGCGCGGCTTTTGCTGGCCGAGACCTTGATGGAGGTATCATCCGGTTGCCCTCCGAAGTTACGAGGTTCTTCCACGGGGGTCGCACGGAGGAGGAGAATCAAGACGCTGATGCAGAGGGAACGAGGTGGGCTGTTTTGATCGCTGGTTCCAGCGGCTACTGGAATTACAGACACCAGTCGGATGTTTGTCACGCGTATCAACTTCTGAGGAAAGGTGGCCTGAAAGAAGAAAATATTGTTGTGTTTATGTACGATGATATTGCTTTCAACGAAGAGAACCCGAGGCCTGGAATTATCATTAACAGTCCACATGGGGATGATGTTTATAAAGGAGTTCCGAAGGATTACACTGGTGAAGATGTTACTGTTAATAATCTTTTCGCTGTTATACTTGGAAACAAGACAGCTCTTACTGGCGGCAGTGGGAAGGTTGTGGATAGTGGTCCCAATGACCATATATTTATATACTACACTGATCATGGTGGCCCTGGAGTGCTTGGGATGCCTACTAGTCCTTACTTATATGCAAAGGATCTCATTGAAGTTTTGAAAAAGAAGAATGCTTCTGGAACGTATAAAAGCCTGGTATTTTACCTTGAGTCTTGTGAATCTGGGAGCATCTTTGAAGGTCTTCTCCCTGAAGGTTTGAATATTTATGCTACAACAGCTTCAAATCCAGATGAAAGCAGTTGGGGAACTTATTGCCCTGGGGAGTATCCCAGTCCTCCCCCAGAATATGAAACTTGCTTAGGTGACCTGTACAGTGTTGCCTGGATGGAAGACAGTGACATTCACAATTTGCGAACAGAAACATTGCATCAACAATATGAACTGGTTAAAAGCAGGACAATTAATGGAAATTCCTTCTATGGCTCTCACGTGATGCAGTATGGTGATATAGGGATTAGTAAGAATAATCTCGTACTATATTTGGGAACTAATCCTGCTAATGATAATTTCACTTTCGTGGACGAAAACTCCTTGAGGCCACCTACAAAAGCAGTCAACCAACGTGATGCTGATCTCATCCATTTTTGGGATAAGTACCGTAAAGCTCCTGAGGGTTCTCCTAGGAAAGTTGAAGCTCAGAAACAAGTTTTGGAAGCTATGTCTCACCGAATGCATTTAGACAATAGCGTAAAACTTGTTGGAAAGCTGTTATTTGGCATTGAAAAGGGTCCCGAAGTGCTCAACACGGTTCGATCTGTTGGGCAACCACTCGTTGATGACTGGGACTGCTTGAAAATGATGGTCAGGACATTTGAGACATATTGTGGATCCTTGTCCCAGTATGGGATGAAGCACATGAGGTCTTTTGCAAACATCTGCAACGCAGGAATACAGAATGAGCAAATGGCGGAGGCCTCAGCACAGGCATGCGTCAGTGTTCCCTCCAGTCCCTGGAGTTCTCTGCACAGGGGTTTCAGTGCATAA 1485 0.4505 MNPFSSALIVFLVATLSCAAFAGRDLDGGIIRLPSEVTRFFHGGRTEEENQDADAEGTRWAVLIAGSSGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGIIINSPHGDDVYKGVPKDYTGEDVTVNNLFAVILGNKTALTGGSGKVVDSGPNDHIFIYYTDHGGPGVLGMPTSPYLYAKDLIEVLKKKNASGTYKSLVFYLESCESGSIFEGLLPEGLNIYATTASNPDESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKSRTINGNSFYGSHVMQYGDIGISKNNLVLYLGTNPANDNFTFVDENSLRPPTKAVNQRDADLIHFWDKYRKAPEGSPRKVEAQKQVLEAMSHRMHLDNSVKLVGKLLFGIEKGPEVLNTVRSVGQPLVDDWDCLKMMVRTFETYCGSLSQYGMKHMRSFANICNAGIQNEQMAEASAQACVSVPSSPWSSLHRGFSA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0778 494 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 Gene3D - 57 353 - -
Lele01g0778 494 FunFam Vacuolar-processing enzyme beta-isozyme 57 353 - -
Lele01g0778 494 PANTHER HEMOGLOBINASE FAMILY MEMBER 48 479 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 FunFam Vacuolar-processing enzyme beta-isozyme 354 482 - -
Lele01g0778 494 Pfam Peptidase C13 family 59 329 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 Coils Coil 490 494 - -
Lele01g0778 494 PIRSF Legumain 3 494 IPR001096 GO:0006508|GO:0008233
Lele01g0778 494 PIRSF AE 2 494 IPR043577 GO:0004197|GO:0051603
Lele01g0778 494 Gene3D - 354 482 IPR046427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0778 Lele-ChrLele01 4503299 4507208 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0778 01 4503299 4507208 Lele01g0778 01 4503299 4507208 ECH
Lele01g0778 01 4503299 4507208 Lele03g0772 03 4503274 4506851 hybridization
Lele01g0778 01 4503299 4507208 Lele04g0771 04 4692584 4696306 hybridization