Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0772 ATGAATCCCTTCTCACCTGCACTCATCGTCTTCCTCGTCGCAACCCTCTCCTGCGCGGCTTTTGCTGCCCGAGACCTCGATGGAGGTATCATCCGGTTGCCCTCCGAAGTTACGAGGTTCTTCCACGGAGGTCGCACGGAGGAGGAGAACCAAGACGCTGATGCAGAGGGAACGAGGTGGGCTGTTTTGATCGCTGGTTCCAGCGGCTACTGGAATTACAGACACCAGTCGGATGTTTGTCACGCGTATCAACTTCTGAGGAAAGGTGGCCTGAAAGAAGAAAATATTGTTGTGTTTATGTACGATGATATTGCTTTCAACAAAGAGAACCCGAGGCCTGGAATTATCATTAACAGTCCACATGGGGATGATGTTTATAAAGGAGTTCCGAAGGATTACACTGGTGAAGATGTTACTGTTAATAATTTTTTCGCTGTTATACTTGGAAACAAGACAGCTCTTACTGGCGGCAGTGGGAAGGTTGTGGATAGTGGTCCCAATGACCATATATTTATATACTACACTGATCATGGTGGCCCAGGAGTGCTTGGGATGCCTACTAGTCCTTACTTATATGCAAATGATCTCATTGAAGTTTTGAAAAAGAAGCATGCTTCTGGAACGTATAAAAGCCTGGTATTTTACCTTGAGGCTTGTGAATCTGGGAGCATCTTTGAAGGTCTTCTTCCTGAAGGTTTGAATATTTATGCTACAACAGCTTCAAATGCAGATGAAAGCAGTTGGGGAACTTATTGCCCTGGGGAGTATCCTAGTCCTCCCTCAGAATATGAAACTTGCTTAGGTGACCTGTACAGTGTTGCCTGGATGGAAGACAGTGACATTCACAATTTGCGAACAGAAACATTGCATCAACAATATGAACTGGTTAAAAGCAGGACAATTAATGGAAATTCCGTCTATGGCTCTCACGTGATGCAATATGGTGCTATAGGGATTAGTAAGAATAATCTTGTACTATATTTGGGAACTAATCCTGCTAATGATAATTTCACTTACGTGGAGGAAAACTCCTTGAGGCCACCTACAAAAGCAGTCAACCAACGTGATGCTGATCTCATCCATTTTTGGGATAAGTACCGTAAAGCTGCTGAGGGTTCTCCTAGGAAAGTTGAAGCTCAGAAACAAGTTTTGGAAGCTATGTCTCACAGAATGCATTTAGACAACAGCGTAAAACTTGTTGGAAAGCTGTTATTTGGCATTGAAAAGTTGAAGCTCAGAAACAAGTTTTGGAAGCTATGTCTCACAGAATGCATTTAG 1278 0.4343 MNPFSPALIVFLVATLSCAAFAARDLDGGIIRLPSEVTRFFHGGRTEEENQDADAEGTRWAVLIAGSSGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNKENPRPGIIINSPHGDDVYKGVPKDYTGEDVTVNNFFAVILGNKTALTGGSGKVVDSGPNDHIFIYYTDHGGPGVLGMPTSPYLYANDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNADESSWGTYCPGEYPSPPSEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKSRTINGNSVYGSHVMQYGAIGISKNNLVLYLGTNPANDNFTYVEENSLRPPTKAVNQRDADLIHFWDKYRKAAEGSPRKVEAQKQVLEAMSHRMHLDNSVKLVGKLLFGIEKLKLRNKFWKLCLTECI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0772 425 FunFam Vacuolar-processing enzyme beta-isozyme 57 353 - -
Lele03g0772 425 Gene3D - 354 417 IPR046427 -
Lele03g0772 425 PANTHER HEMOGLOBINASE FAMILY MEMBER 48 410 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PIRSF Legumain 4 418 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PIRSF AE 4 418 IPR043577 GO:0004197|GO:0051603
Lele03g0772 425 Pfam Peptidase C13 family 59 329 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Lele03g0772 425 Gene3D - 57 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0772 Lele-ChrLele03 4503274 4506851 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0772 03 4503274 4506851 Lele03g0772 03 4503274 4506851 ECH
Lele01g0778 01 4503299 4507208 Lele03g0772 03 4503274 4506851 hybridization
Lele02g0754 02 4545853 4550185 Lele03g0772 03 4503274 4506851 hybridization