Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0771 ATGAATTTCTTCTCATCTGCACTCATTGTCCTCCTCGTCGCAACTCTCTCCTGCGCGGCTTTTGCGGCCCGTGACTTTGATGGAGGTATCATCCGGTTGCCCTCCCAAGTTACGAGGTTCTTCCACGGAGGTCGCACGGAGGAGGAGAACCAAGACGCTGATGCAGAGGGAACGAAGTGGGCTGTTTTGATCGCTGGTTCCAGCGGCTACTGGAATTACAGACACCAGTCGGATGTTTGTCACGCGTATCAACTTCTGAGGAAAGGTGGCCTGAAAGAAGAAAATATTGTTGTGTTTATGTACGATGATATTGCTTTCAACGAAGAGAACCCGAGGCCTGGAATTATCATCAACAGTCCACATGGGGGTGATGTTTATAAAGGAGTTCCGAAGGATTACACTGGTGAAGATGTTACTGTTAATAATTTTTTCTCTGTCATACTTGGAAACAAGACAGCTCTTACTGGTGGAAGTGGGAAGGTTGTGGATAGTGGTCCCAATGACCATATATTTATATACTACACTGATCATGGTGGGCCAGGAGTGCTTGGGATGCCTACTAGTCCTTACATATACGCAAATGATCTCATCGAAGTTTTGAAAAAGAAGCATGCTTCTGGAACGTATAAAAGCCTGGTATTCTACCTTGAGGCTTGTGAATCTGGGAGCATCTTTGAAGGTCTTCTTCCTGAAGGTTTGAATATCTATGCTACAACAGCTTCAAATGCAGATGAAAGCAGTTGGGGAACTTATTGCCCTGGGGAGTATCCTAGTCCTCCCCCAGACTATGAAACTTGCTTAGGTGACCTGTACAGTGTTGCCTGGATGGAAGACAGTGACATGCACAATTTGCGAACAGAAACATTGCATCAACAGTATGAACTGGTTAAAAGAAGGACAATTGGAAATTCCGTCTATGGCTCTCACGTGATGCAATATGGTGATATAGGGATTAGTGAGAATCAACTCGTGCTATATTTGGGAACTAATCCTGCTAATGATAATTTCACATACGTGGATGAAAACTCCTTGAGGCCACCTACAAAAGCAGTCAACCAACGTGATGCTGATCTCGTCCATTTTTGGGATAAGTACCGCAAAGCTCCTGAGGGTTCTCCTAGGAAAGTTGAAGCTCAGAAACAAGTCTTGGAAGCTATGTCTCACAGAATGCATTTAGACAACAACGTAAAACTTATTGGAAAGCTGTTATTTGGCATTGAAAAGGGTCCGGAAGTGCTCAACACTGTTCGATCTGTTGGGCAACCACTCGTTGATGACTGGGACTGCTTGAAAATGATGGTCAGGACATTTGAGACATATTGTGGATCCTTGTCCCAGTATGGGATGAAGCACATGAGGTCTTTTGCAAACATCTGCAACGCCGGAATACAGAACGAGCAAATGGCGGAGGCCTCGGCACAGGCATGCATCAGTGTTCCCGCCAGTCCTTGGAGTTCTCTGCACAGGGGTTTCAGTGCATAA 1482 0.4541 MNFFSSALIVLLVATLSCAAFAARDFDGGIIRLPSQVTRFFHGGRTEEENQDADAEGTKWAVLIAGSSGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGIIINSPHGGDVYKGVPKDYTGEDVTVNNFFSVILGNKTALTGGSGKVVDSGPNDHIFIYYTDHGGPGVLGMPTSPYIYANDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNADESSWGTYCPGEYPSPPPDYETCLGDLYSVAWMEDSDMHNLRTETLHQQYELVKRRTIGNSVYGSHVMQYGDIGISENQLVLYLGTNPANDNFTYVDENSLRPPTKAVNQRDADLVHFWDKYRKAPEGSPRKVEAQKQVLEAMSHRMHLDNNVKLIGKLLFGIEKGPEVLNTVRSVGQPLVDDWDCLKMMVRTFETYCGSLSQYGMKHMRSFANICNAGIQNEQMAEASAQACISVPASPWSSLHRGFSA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0771 493 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 Pfam Peptidase C13 family 59 328 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PIRSF AE 2 493 IPR043577 GO:0004197|GO:0051603
Lele04g0771 493 PIRSF Legumain 1 493 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 PANTHER HEMOGLOBINASE FAMILY MEMBER 48 478 IPR001096 GO:0006508|GO:0008233
Lele04g0771 493 FunFam Vacuolar-processing enzyme beta-isozyme 57 352 - -
Lele04g0771 493 Gene3D - 57 352 - -
Lele04g0771 493 FunFam Vacuolar-processing enzyme beta-isozyme 353 481 - -
Lele04g0771 493 Gene3D - 353 480 IPR046427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0771 Lele-ChrLele04 4692584 4696306 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0771 04 4692584 4696306 Lele04g0771 04 4692584 4696306 ECH
Lele01g0778 01 4503299 4507208 Lele04g0771 04 4692584 4696306 hybridization
Lele02g0754 02 4545853 4550185 Lele04g0771 04 4692584 4696306 hybridization