Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0720 ATGCTGTCTTTTGTAACAGAAAATATGGGCTTACTCTGCAGCAGAAACCGTCGATATAATGATGCTGACGCTGAAGAAAACGCACAGGCTGCTGAAATTGAAAAGAGAATAGAGCAAGAAACGAAGGCTGAAAAGCATATTCGGAAACTTCTACTACTTGGCAAGAAATTGCAGGATTCTATAAAACTCTTGTTTCAAACTGGTTTTGATGAGGCAGAGCTCAAGAGCTATACACCAGTCATTCATGCTAATGTGTATCAGACAATAAAAATACTTCATGATGGATCAAAGGAATTGGCTCTGAATGAAACTGAGTCTTCAAAGTATGCGTTATCCAATGAAAACAAGGATATTGGAGAGAAACTATCAGAAATAGGTGGCAGGCTGGATTACCCACGTCTCACCAAGGAACTAGCACAGGAAATAGAAACTTTATGGGAAGATGCTGCAATTCAGGAAACATATGTCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAATTATTTCATGGAAAATTTGCAGAGACTGGCTGATGCTGATTATGTTCCAACAAAGGAGGATGTTCTGTATGCAAGAGTTCGTACCACTGGCGTTGTAGAGATTCACCCAGTTGGAGAAAACAAGAAAAGTGGTGAGGTATATAGGCTCTTTGATGTTGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATTTGTTTGAAGGAGTTACTGCTGTAATATTCTGCGCTGCTATAAGCGAGTATGATCAAGCACTTTTTGAGGATGACAACAAGAACAGAATGATGGAGACTAAGGAACTTTTCGAGTGGGTCCTAAAGCAGCCGTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAATAAGTTTGACATATTCGAGAAGAAGATCCTAAAAGTCCCGCTGAATGTATGCGAATGGTTCAAAGATTACCAGCCAGTTTCCTCTGGGAAACAAGAGATCGAGCATGCATACGAGTTTGTGAAGAAAAAATTCGAGGAATTGTATTTTCAGAGAACAGCACCTGATCGCGTGGATCGTGTCTTTAAAATATATCGGACCACTGCCCTGGATCAGAAGCTTGTGAAGAAGACATTCAAGCTTGTGGATGAGTCATTGAGGCGGAGGAATCTCTTTGAAGCGGGGCTATTATGA 1155 0.4069 MLSFVTENMGLLCSRNRRYNDADAEENAQAAEIEKRIEQETKAEKHIRKLLLLGKKLQDSIKLLFQTGFDEAELKSYTPVIHANVYQTIKILHDGSKELALNETESSKYALSNENKDIGEKLSEIGGRLDYPRLTKELAQEIETLWEDAAIQETYVRGNELQVPDCANYFMENLQRLADADYVPTKEDVLYARVRTTGVVEIHPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQALFEDDNKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSSGKQEIEHAYEFVKKKFEELYFQRTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDESLRRRNLFEAGLL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0720 384 SMART galpha_1 27 383 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 Gene3D - 70 195 IPR011025 GO:0007165
Lele01g0720 384 CDD G-alpha 61 378 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 Pfam G-protein alpha subunit 30 371 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 381 IPR027417 -
Lele01g0720 384 SUPERFAMILY Transducin (alpha subunit), insertion domain 69 194 IPR011025 GO:0007165
Lele01g0720 384 FunFam Guanine nucleotide-binding protein alpha-1 subunit 70 195 - -
Lele01g0720 384 ProSiteProfiles G-alpha domain profile. 46 384 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 20 380 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 FunFam Guanine nucleotide-binding protein alpha-1 subunit 183 371 - -
Lele01g0720 384 PRINTS Alpha G protein (transducin) signature 215 232 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 PRINTS Alpha G protein (transducin) signature 182 204 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 PRINTS Alpha G protein (transducin) signature 237 265 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 PRINTS Alpha G protein (transducin) signature 49 64 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 PRINTS Alpha G protein (transducin) signature 283 292 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele01g0720 384 Gene3D - 57 371 IPR027417 -
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 35 44 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 270 281 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 319 334 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 336 348 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 200 215 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele01g0720 384 PRINTS Plant G protein alpha subunit signature 118 132 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0720 Lele-ChrLele01 4221191 4225256 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0720 01 4221191 4225256 Lele01g0720 01 4221191 4225256 ECH
Lele01g0720 01 4221191 4225256 Lele03g0717 03 4232350 4238445 hybridization
Lele01g0720 01 4221191 4225256 Lele04g0720 04 4378019 4386256 hybridization