Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0717 ATGCCACGATGTCGAACGACAACCCAGCTACCCACCCTGACAGCGAGCCCTAAAACACAGTCTGATTTCTGGTGGAGCTTGACTTGTGCTTCTTCTATGCTTTCTTTTGTAACAGAAAATATGGGCTTACTCTGCAGCAGAAACCGTCGATATAATGATGCTGACGCTGAAGAAAACGCACAGGCTGCTGAAATTGAAAAGAGAATAGAGCAAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGTGCTGGTGAGTCAGGGAAGTCTACAATCTTTAAACAGATAAAACTCTTGTTTCAAACTGGTTTTGATGAGGCAGAGCTCAAGAGCTACACACCCGTCATTCATGCTAATGTGTATCAGACAATAAAAATACTGCATGATGGATCAAAGGAATTGGCTCTGAATGAAACTGAGTCTTCAAAGTATGCGATATCCAATGAAAACAAGGATATTGGAGAGAAACTATCAGAAATAGGTGGCAGGCTGGATTACCCACGTCTCACCAAGGAACTAGCACAGGAAATAGAAACTTTATGGGAAGATGCTGCAATTCAGGAAACATATGTCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAATTATTTCATGGAAAATTTGCAGAGACTGTCTGATGCTGATTATGTTCCAACAAAGGAGGATGTTCTGTATGCAAGAGTTCGTACCACTGGCGTTGTAGAGATTCAGTTCAGCCCAGTTGGAGAAAACAAGAAAAGTGGTGAGGTATATAGGCTATTTGATGTTGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATTTGTTTGAAGGAGTTACTGCTGTAATATTCTGCGCTGCTATAAGCGAGTATGATCAAGCACTTTTTGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTCGAGTGGGTCCTAAAGCAGCCGTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAATAAGTTTGACATATTCGAGAAGAAGATCCTAAAAGTCCCGCTTAATGTATGCGAATGGTTCAAAGGTTACCAGCCAGTTTCCTCTGGGAAACAAGAGATCGAGCATGCATATGAGTTTGTGAAGAAAAAATTCGAGGAATTGTATTTTCAGAGAACAGCACCTGATCGCGTGGATCGTGTCTTTAAAATATATCGGACCACTGCCCTGGATCAGAAGCTTGTGAAGAAGACATTCAAGCTTGTGGATGAATCATTGAGGCGGAGGAATCTCTTTGAAGCGGGGCTATTATGA 1275 0.4141 MPRCRTTTQLPTLTASPKTQSDFWWSLTCASSMLSFVTENMGLLCSRNRRYNDADAEENAQAAEIEKRIEQETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYTPVIHANVYQTIKILHDGSKELALNETESSKYAISNENKDIGEKLSEIGGRLDYPRLTKELAQEIETLWEDAAIQETYVRGNELQVPDCANYFMENLQRLSDADYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQALFEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKGYQPVSSGKQEIEHAYEFVKKKFEELYFQRTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDESLRRRNLFEAGLL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0717 424 Gene3D - 108 233 IPR011025 GO:0007165
Lele03g0717 424 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 52 420 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 Gene3D - 81 411 IPR027417 -
Lele03g0717 424 PRINTS Alpha G protein (transducin) signature 81 96 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 PRINTS Alpha G protein (transducin) signature 277 305 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 PRINTS Alpha G protein (transducin) signature 255 272 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 PRINTS Alpha G protein (transducin) signature 323 332 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 PRINTS Alpha G protein (transducin) signature 220 242 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 CDD G-alpha 80 418 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 SUPERFAMILY Transducin (alpha subunit), insertion domain 107 232 IPR011025 GO:0007165
Lele03g0717 424 SMART galpha_1 59 423 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 FunFam Guanine nucleotide-binding protein alpha-1 subunit 108 233 - -
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 359 374 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 156 170 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 310 321 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 117 130 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 132 146 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 67 76 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 240 255 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 PRINTS Plant G protein alpha subunit signature 376 388 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele03g0717 424 ProSiteProfiles G-alpha domain profile. 78 424 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele03g0717 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 421 IPR027417 -
Lele03g0717 424 FunFam Guanine nucleotide-binding protein alpha-1 subunit 220 411 - -
Lele03g0717 424 Pfam G-protein alpha subunit 62 411 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0717 Lele-ChrLele03 4232350 4238445 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0717 03 4232350 4238445 Lele03g0717 03 4232350 4238445 ECH
Lele01g0720 01 4221191 4225256 Lele03g0717 03 4232350 4238445 hybridization
Lele02g0704 02 4238111 4246893 Lele03g0717 03 4232350 4238445 hybridization