Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0720 ATGATTGTACTCTGCATGCCCGTGCTTGTTGGTTGTCGAAATTTCTTGCTTTCTACTGCAGAGAAGAACCTGTCTGTCTGTGGACTAGATATATTAGCCATGCATAATGATGCAAGTTGCAAACTACTGAAACTGGGAAGCAAGAAACAGTCTGATTTCTGGGGGAGCTTGACTTGTGCTTCTTCTATGCTTTCTTTTGTAACAGAAAATATGGGCTTACTCTGCAGCAGAAACCGTCGATATAATGATGCTGACGCTGAAGAAAATGCACAGGCTGCTGAAATTGAAAAGAGAATAGAGCAAGAAACGAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGTATTGTATGAAAATTTTAAAATCAAGTATCATACGAGGGGTGATGGTTTTCCTGGTTTGATGGAATGTCACATATCATTTGTTGGTAGTGTCTGCTGGCTAGTGCTGATAAAACTCTTGTTTCAAACTGGTTTTGATGAGGCAGAGCTCAATAGCTATACACCAGTCATTCATGCCAATGTGTATCAGACAATAAAAATACTGCATGACGGATCAAAGGAATTGGCTCTGAATGAAACTGAGTCTTCAAAGTATGCGGTATCCAAGGAAAACAAGAATATTGGAGAGAAACTATCGGAAATAGGTGGCAGGTTGGATTACCCACGTCTCACCAAGGAACTTGCACAGGAAATAGAGACTTTATGGAAAGATGCTGCAATTCAGGAAACATATGTCCGTGGTAATGAACTCCAAGTTCCAGACTGTGCTAATTATTTCATGGAAAATTTGCAAAGACTGTCTGATGCTGATTACGTTCCAACAAAGGCGGATGTTCTGTATGCAAGAGTTCGTACCACTGGTGTTGTAGAGATTCAGTTCAGTCCAGTTGGAGAAAACAAGAAAAGTGGTGAGGTATATAGGCTCTTTGATGTTGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATTTGTTTGACGGAGTTACTGCTGTAATATTCTGTGCTGCTATAAGCGAGTATGATCAAACACTTTTCGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTAAAGCAGCCTTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTCGAGAAGAAGATCCTAAAAGTCCCGCTGAATGTATGTGAATGGTTCAAAGATTACCAGCCAGTTTCCTCTGGGAAACAAGAGATCGAGCATGCATACGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTTCAGAGCACCTCACCTGAGCGCGTGGATCGCGTCTTTAAAATATATCGGACCACTGCCCTGGATCAGAAGCTTGTGAAGAAGACATTCAAGCTTGTGGATGAGTCATTGAGGCGGAGGAATCTCTTTGAAGCGGGGTTAATCTTGGATGAGAAACAAGCCAATGAACAGAACACGTATCTCGATTAACAAAGAACAGTTTTGCATATTGGTGATGGCACGCCCGGTTCTGAGATTGCAGCTGAAACTGCCGCAGCATTCGCTTCTTCCTCTGTTGTTTTCAGGACTGTCGATGGTGCTTACGCTCGACATCTCCTCAACAAAGCCAAACTGGATGAGTTGTTGTGGGCAGCAACATGGCTATATATTGCAACCAAGAAACCAATGAATTTGAAGTACGTTCAAGAGGAAGCCATAAGTGCTTACGTGAATGAGTTTAGTTGGGATCTTAAATACGCTGGAGCTCAAGTGATTCTCACCAGGGTTTAA 1776 0.4127 MIVLCMPVLVGCRNFLLSTAEKNLSVCGLDILAMHNDASCKLLKLGSKKQSDFWGSLTCASSMLSFVTENMGLLCSRNRRYNDADAEENAQAAEIEKRIEQETKAEKHIQKLLLLVLYENFKIKYHTRGDGFPGLMECHISFVGSVCWLVLIKLLFQTGFDEAELNSYTPVIHANVYQTIKILHDGSKELALNETESSKYAVSKENKNIGEKLSEIGGRLDYPRLTKELAQEIETLWKDAAIQETYVRGNELQVPDCANYFMENLQRLSDADYVPTKADVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFDGVTAVIFCAAISEYDQTLFEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSSGKQEIEHAYEFVKKKFEELYFQSTSPERVDRVFKIYRTTALDQKLVKKTFKLVDESLRRRNLFEAGLILDEKQANEQNTYLDXQRTVLHIGDGTPGSEIAAETAAAFASSSVVFRTVDGAYARHLLNKAKLDELLWAATWLYIATKKPMNLKYVQEEAISAYVNEFSWDLKYAGAQVILTRV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0720 591 Pfam G-protein alpha subunit 152 464 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 SUPERFAMILY Transducin (alpha subunit), insertion domain 160 285 IPR011025 GO:0007165
Lele04g0720 591 CDD G-alpha 152 471 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 PRINTS Alpha G protein (transducin) signature 188 203 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 PRINTS Alpha G protein (transducin) signature 330 358 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 PRINTS Alpha G protein (transducin) signature 308 325 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 PRINTS Alpha G protein (transducin) signature 376 385 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 Gene3D - 161 286 IPR011025 GO:0007165
Lele04g0720 591 SUPERFAMILY Six-hairpin glycosidases 487 590 IPR008928 GO:0005975
Lele04g0720 591 FunFam Guanine nucleotide-binding protein alpha-1 subunit 161 286 - -
Lele04g0720 591 SMART galpha_1 89 476 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 FunFam Guanine nucleotide-binding protein alpha-1 subunit 269 464 - -
Lele04g0720 591 Gene3D - 478 539 IPR012341 GO:0005975
Lele04g0720 591 Gene3D - 540 591 IPR012341 GO:0005975
Lele04g0720 591 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 82 473 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 PRINTS Plant G protein alpha subunit signature 97 106 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele04g0720 591 PRINTS Plant G protein alpha subunit signature 412 427 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele04g0720 591 PRINTS Plant G protein alpha subunit signature 429 441 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lele04g0720 591 Pfam Glycosyl hydrolase family 9 488 539 IPR001701 GO:0004553|GO:0005975
Lele04g0720 591 ProSiteProfiles G-alpha domain profile. 131 477 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele04g0720 591 Gene3D - 152 464 IPR027417 -
Lele04g0720 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 474 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0720 Lele-ChrLele04 4378019 4386256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0720 490 591 Glycoside Hydrolase AT3G43860 53.906 1.26e-26 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0720 04 4378019 4386256 Lele04g0720 04 4378019 4386256 ECH
Lele01g0720 01 4221191 4225256 Lele04g0720 04 4378019 4386256 hybridization
Lele02g0704 02 4238111 4246893 Lele04g0720 04 4378019 4386256 hybridization