Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0716 ATGATGAGCTTAATCCAGAAAGGATCCCAATCAGAAACAAAGCTAAGCTCCCCAAACAAGGCGACTGCTTTGAATCCAAATGCTGCCGAATTTGTTCCTTTTTCCCTCAGATCATTGCCATCTGGAAGTACCAGCTCCGTAGATGCAACAGCAAGGTTTCCTACTGCTGGAGCTCTTGGGAAAGCAATTTTAGATCGATCAGAGTCATCCATTTCAAATCATTCTGATGATGAAGTCCACCAATACTGGCGTTGTCAGCTCCCTGATGACATCACCCCTGACTTCAAGGTCATGGGAGAGGATGAACCCCAAGGTCTTAACAATCTCTCTTTAGCGGGCTTGTCTATACATGATGATCATGAAGCACCAAGGTTTCCTTCTTCTAATGGAAGTAGATATCTATTAAATGAGCAGCAGGAACTGTCTCAATTTCACCTTAATGGCAATAGCTTTGCTGATAAATTAAGATTTTCCAATTCAGCAGCCTATAGGGAGGACCCATCTTCGGCAAATTTTCTGAACTCATTAACGAAGCCTTGGGATATGCAAATTGGGAGTACCAACCAGCACTTTGGCAGTGGTCGAGATGGGCTTACATGTGATGATAACTCTGGACATGGATTCTTAAATGATCTTTTGAGTGAACAAGCTATAATGGATGATACTGATATGAACCCTCTGGAGTTTTTGGCTGCTCAGTTCCCTGGTTTTGCTTCAGAAAGCCTTGTGGAAGTTTACTTTGCGAATGGATGTGATTTAAATCTGACCATCGAGATGCTCACTCAGTTGGAGCTTCAAGTTGATGGCAATTTCAATCAGAATCTGAATTCAAAGACTGTTTCAGCTCCCAATCTGAGTGCAATGGACTTCCCTGCACTTACTTCCCCTGATGGCCACACTACTTCTGTTAAATATGCAGCCGATAATGTTCAACAAAGCGGCAATCCTTTTGGATCATCTGACAAGGACATGCTTCTTTTTAAGTCTAGCTCTTCAATTCCATCTAGAGGTGCTATTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGACTCTGGTATATGGAAATATGATAAAAATGGTTCTGGTGATGCCACAATTGGCTCAAGTAGAAGTTCTCATGCTCTAGCTCATGCGTATAATGGTGGTCAGGGAAGAGCGAATTTCAGTGATAGGTTGACAAACCGTGGTTCAGCTCGAGCAGCTCCTATTTGGCTTGAAACTGGTGATGCAGTCGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGGTTGCGTAATACATATTTTGAGCAGGCACGGCAAGCATACCTCATTGGAAATAAGGCCTTAGCAAAGGAACTGAGTGTTAAAGGGCAACTGCACAACATGCACATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGGCAGAGGAATCCCGTTTCTCCAGAGATGATGGGCAACGGAAGAGCACATGAAAGAATGATAGACCTACATGGGCTGCACGTTAGTGAAGCCATTCATGTGCTGAAACATGAGCTGAGCGTGTTAAGAAGCACTGCCAGAGCTGCCGACCAACGCTTGCAGGTCTATATTTGTGTCGGTACCGGTCATCACACGCGGGGTTCCCGCACTCCTGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAAGAAGAGGGTCTAGAGTACAAGGAACCACAGCCGGGCCTGCTTCGAGTAGTGATATATTGA 1740 0.4477 MMSLIQKGSQSETKLSSPNKATALNPNAAEFVPFSLRSLPSGSTSSVDATARFPTAGALGKAILDRSESSISNHSDDEVHQYWRCQLPDDITPDFKVMGEDEPQGLNNLSLAGLSIHDDHEAPRFPSSNGSRYLLNEQQELSQFHLNGNSFADKLRFSNSAAYREDPSSANFLNSLTKPWDMQIGSTNQHFGSGRDGLTCDDNSGHGFLNDLLSEQAIMDDTDMNPLEFLAAQFPGFASESLVEVYFANGCDLNLTIEMLTQLELQVDGNFNQNLNSKTVSAPNLSAMDFPALTSPDGHTTSVKYAADNVQQSGNPFGSSDKDMLLFKSSSSIPSRGAIDFASAVRKLASQDSGIWKYDKNGSGDATIGSSRSSHALAHAYNGGQGRANFSDRLTNRGSARAAPIWLETGDAVANMYSELREEARDHARLRNTYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVSPEMMGNGRAHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLEYKEPQPGLLRVVIY 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0716 579 SMART SMR_2 494 579 IPR002625 -
Lele01g0716 579 CDD CUE_CID7_like 225 266 IPR041806 -
Lele01g0716 579 Pfam Smr domain 497 566 IPR002625 -
Lele01g0716 579 SUPERFAMILY SMR domain-like 495 577 IPR036063 -
Lele01g0716 579 ProSiteProfiles Smr domain profile. 497 579 IPR002625 -
Lele01g0716 579 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 2 579 - -
Lele01g0716 579 MobiDBLite consensus disorder prediction 1 22 - -
Lele01g0716 579 Pfam Domain of unknown function (DUF1771) 417 480 IPR013899 -
Lele01g0716 579 SMART DUF1771_2 416 481 IPR013899 -
Lele01g0716 579 Gene3D - 464 578 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0716 Lele-ChrLele01 4197368 4200579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0716 01 4197368 4200579 Lele01g0716 01 4197368 4200579 ECH
Lele01g0716 01 4197368 4200579 Lele03g0713 03 4210735 4213961 hybridization
Lele01g0716 01 4197368 4200579 Lele04g0716 04 4350370 4353607 hybridization