Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0713 ATGAGCTTAATCCAGAAAGGATCCCAATCAGAAACAAAGCTAAGCTCCCCAAACAAGGCAACTACTTTGAATCCAAATGCTGCCGAATTTGTTCCTTATTCCCTCAGATCATTGCCATCTGGAAGTACCAGCTCCGTAGATGCAACAGCAAGGTTTCCTACTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCTGATGATGAGGTCCACCAATACTGGCGTTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAGGATGAACCCCAAGGTCTTAACAATCTCTCTTTAGTGGGCTTGTCTATACATGATGATCATGAAGCACCAAGGTTTCCTTCTTCTAATGGAAGTAGATATCTATTAAATGAGCAGCAGGAACTGTCTCAATTTCACCTTAATGGCAATAGCTTTGCTGATAAATTAAGATTTTCCAATTCAGCAGCCTCTAGGGAGGACCCATCTTCAGCAAATTTTCTGAACTCATCAACGAAGCCTTGGGATATGCGAATTGGGAGTACCAACCAGCACTTTGGCAGTGGTCGAGATGGGCTTACTTATGATGATAACTCTGGACATGGATTCTTAAATGATCTTTTGAGTGAACAAGCTATAATGGATGATACTGATATGAACCCTCTGGAGTTTTTGGCTGCTCAATTCCCTGGTTTTGCTTCAGAAAGCCTTGTGGAAGTTTACTTTGCGAATGGATGTGATTTAAATCTGACCATCGAGATGCTCACTCAGTTGGAGCTTCAAGTTGATGGCAATTTCAATCAGAATCTGAATTCAAAGACTGTTTCAGCTCCCAATCTGAGTGCAATGGACTTCCCTGCACTTACTTCACCTGATGGCCACACTACTTCTGTTAAATATGCAGCCGATAATGTTCAACAAAGCGGCAATCCTTTTGGATCATCCGACAAGGACATGCTTCTTTTTAAGTCTAGTTCTTCAATTCCATCTAGAGGTGCTATTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGACTCTGGTATATGGAAGTATGATAAAAATGGTTCTGGTGATGCCACTATTGGCTCAAGTAGAAGTTCTCATGCTGCTCATGCGTATAATGGTGGTCAGGGAAGAGCGAATTTCAGTGATAGGTTGACAAACCGTGGTTCAGCTCGAGCAGCTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCTGAGCTGCGTGAGGAGGCTCGTGATCATGCACGGTTGCGTAATGCATATTTTGAGCAGGCACGGCAAGCATACCTCATTGGAAATAAGGCCTTAGCAAAGGAACTGAGTGTTAAAGGGCAACTGCACAACATGCACATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGGCAGAGGAATCCAGTTTCTCCAGAGATGATGGGCAACGGAAGAGCACATGAAAGAATGATAGACCTACATGGGCTGCACGTTAGTGAAGCCATTCATGTGCTAAAACATGAACTGAGCGTGCTAAGAAGCACTGCCAGAGCTGCCGACCAACGCTTGCAGGTCTATATTTGTGTCGGTACCGGTCATCACACCCGGGGTTCCCGCACTCCTGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAAGAAGAGGGTCTAGAGTACAAGGAACCACAGCCAGGCCTGCTTCGAGTAGTGATATATTGA 1734 0.4446 MSLIQKGSQSETKLSSPNKATTLNPNAAEFVPYSLRSLPSGSTSSVDATARFPTAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDEPQGLNNLSLVGLSIHDDHEAPRFPSSNGSRYLLNEQQELSQFHLNGNSFADKLRFSNSAASREDPSSANFLNSSTKPWDMRIGSTNQHFGSGRDGLTYDDNSGHGFLNDLLSEQAIMDDTDMNPLEFLAAQFPGFASESLVEVYFANGCDLNLTIEMLTQLELQVDGNFNQNLNSKTVSAPNLSAMDFPALTSPDGHTTSVKYAADNVQQSGNPFGSSDKDMLLFKSSSSIPSRGAIDFASAVRKLASQDSGIWKYDKNGSGDATIGSSRSSHAAHAYNGGQGRANFSDRLTNRGSARAAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVSPEMMGNGRAHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLEYKEPQPGLLRVVIY 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0713 577 Pfam Domain of unknown function (DUF1771) 415 478 IPR013899 -
Lele03g0713 577 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 577 - -
Lele03g0713 577 SUPERFAMILY SMR domain-like 493 575 IPR036063 -
Lele03g0713 577 SMART DUF1771_2 414 479 IPR013899 -
Lele03g0713 577 Pfam Ataxin-2 C-terminal region 21 32 IPR009818 -
Lele03g0713 577 Pfam Smr domain 495 564 IPR002625 -
Lele03g0713 577 CDD CUE_CID7_like 224 265 IPR041806 -
Lele03g0713 577 SMART SMR_2 492 577 IPR002625 -
Lele03g0713 577 ProSiteProfiles Smr domain profile. 495 577 IPR002625 -
Lele03g0713 577 MobiDBLite consensus disorder prediction 1 26 - -
Lele03g0713 577 Gene3D - 462 576 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0713 Lele-ChrLele03 4210735 4213961 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0713 03 4210735 4213961 Lele03g0713 03 4210735 4213961 ECH
Lele01g0716 01 4197368 4200579 Lele03g0713 03 4210735 4213961 hybridization
Lele02g0700 02 4211969 4215189 Lele03g0713 03 4210735 4213961 hybridization