Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0716 ATGAGCTTAATCCAGAAAGGATCCCAATCAGAAACAAAGCTAAGCTCCCCAAACAAGGCAACTACTTTGAATCCAAATGCTGCGGAATTTGTCCCTTTTTCCCTCAGATCATTGCCATCTGGAAGTACTAGCTCTGTAGATGCAACAGCAAGGTTTCCTACTGCTGGAGCTCTTGGGAAAGCGGTTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCTGATGACGAGGTCCACCAATACTGGCGTTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAGGATGAACCCCAAGGTCTTAACAATCTCTCTTTAGCGGGCTTGTCTATACATGATGATCATGAAGCACCAAGGTTTCCTTCTTCTAATGGAAGTAGATATCTATTAAATGAGCAGCAGGAATTGTCCCAATTTCACCTAAATGGCAATAGCTTTGCTGATAAATTAAGATTTTCCAATTCAGCAGCCTATAGGGAGGACCCATCTTCAGCAAATTTTCTGAACCCATTAACGAAGCCTTGGGATATGCAAATTGGGAGTACTAACCAGCATTTCGGCAGTGGTCGAGATGGGCTTACTCATGAAGATAACTCTGGACATGGATTCTTAAATGATCTTTTGAGTGAACAAGCTATAATGGATGATAATGATATGAACCCTTTGGAGTTTTTGGTTGTTCAGTTCCCTGGTTTTGCTTCAGAAAGCCTTGCGGAAGTTTACTTTGCTAATGGATGTGATTTAAATCTGACCATTGAGATGCTCACTCAGTTGGAGCTTCAAGTTGATGGCAATTTCAATCAGAATCTGAATTCAACGACTGTTTCAGCTCCTAACCTGAGTGCAATGGACTTCCCTGCACTTACTTCACCTGATGGCCACACTACTTCTGTTAAATATTCTGCAGATAATGTTCAACAAAGCAGCAAGCCTTATGGATCGTCTGACAAGGACATGCTTCTTTTTAAGTCTAGCTCTTCAATTCCATCTAGAGGTGCTATTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGAATCTGGTATATGGAAGTATGATAAAAATGGTTCTGGTGATGCCACTATTGGCTCAAGTCGAAGTTCTCGTGCTCTAGCTCATGCGTATAATGGTGGTCAGGGAAGAGCGACTTTTGGTGATGGGTTGACAAACTGTGGTTCAGCTCGAGCGGCTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCCCGGTTGCGCAATACATATTTTGAGCAGGCACGGCAAGCATACCTCATTGGAAACAAGGCCTTAGCAAAGGAACTGAGTGTTAAAGGGCAACTGTACAACATGCACATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGGCAGAGGAATCCAGTTTCTCCAGAGATGATGGGAAACGGAAGAGGACATGAAAGAATGATAGACCTACATGGACTACATGTTAGTGAAGCCATTCATGTGCTAAAACATGAATTGAGCGTGCTAAGAAGCACTGCCAGAGCTGCCGACCAGCGTTTGCAGGTTTATATATGTGTCGGTACCGGTCATCATACCCGGGGTTCCCGCACTCCTGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAAGAAGAGGGTCTAGACTACAAGGAACCACAGCCAGGCCTGCTTCGAGTAGTGATATATTAA 1737 0.4404 MSLIQKGSQSETKLSSPNKATTLNPNAAEFVPFSLRSLPSGSTSSVDATARFPTAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDEPQGLNNLSLAGLSIHDDHEAPRFPSSNGSRYLLNEQQELSQFHLNGNSFADKLRFSNSAAYREDPSSANFLNPLTKPWDMQIGSTNQHFGSGRDGLTHEDNSGHGFLNDLLSEQAIMDDNDMNPLEFLVVQFPGFASESLAEVYFANGCDLNLTIEMLTQLELQVDGNFNQNLNSTTVSAPNLSAMDFPALTSPDGHTTSVKYSADNVQQSSKPYGSSDKDMLLFKSSSSIPSRGAIDFASAVRKLASQESGIWKYDKNGSGDATIGSSRSSRALAHAYNGGQGRATFGDGLTNCGSARAAPVWLETGDAVANMYSELREEARDHARLRNTYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQESIYRQRNPVSPEMMGNGRGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYKEPQPGLLRVVIY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0716 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 578 - -
Lele04g0716 578 Gene3D - 463 577 IPR036063 -
Lele04g0716 578 SMART SMR_2 493 578 IPR002625 -
Lele04g0716 578 Pfam Domain of unknown function (DUF1771) 416 479 IPR013899 -
Lele04g0716 578 ProSiteProfiles Smr domain profile. 496 578 IPR002625 -
Lele04g0716 578 SMART DUF1771_2 415 480 IPR013899 -
Lele04g0716 578 CDD CUE_CID7_like 224 265 IPR041806 -
Lele04g0716 578 Pfam Smr domain 496 563 IPR002625 -
Lele04g0716 578 SUPERFAMILY SMR domain-like 494 576 IPR036063 -
Lele04g0716 578 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0716 Lele-ChrLele04 4350370 4353607 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0716 04 4350370 4353607 Lele04g0716 04 4350370 4353607 ECH
Lele01g0716 01 4197368 4200579 Lele04g0716 04 4350370 4353607 hybridization
Lele02g0700 02 4211969 4215189 Lele04g0716 04 4350370 4353607 hybridization